RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 ADAM9Q13443 819 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 CTTNQ14247 550 aaKnown RBP7.06□□□□□ -1.28
SPEN-204ENST00000471538 EPHA7Q15375 998 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 TEX35Q5T0J7 233 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 CC2D1AQ6P1N0 951 aaPredicted RBP7.06□□□□□ -1.28
SPEN-204ENST00000471538 RRAGAQ7L523 313 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 NIPA1Q7RTP0 329 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 KRT26Q7Z3Y9 468 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 KIAA1328Q86T90 577 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 SMAP1Q8IYB5 467 aaPredicted RBP7.06□□□□□ -1.28
SPEN-204ENST00000471538 EHBP1Q8NDI1 1231 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 NEK11Q8NG66 645 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 LPAR1Q92633 364 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 BORCS6Q96GS4 357 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 CCDC42Q96M95 316 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 AGBL1Q96MI9 1066 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 MXRA8Q9BRK3 442 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 LSM14BQ9BX40 385 aaKnown RBP7.06□□□□□ -1.28
SPEN-204ENST00000471538 PARD6BQ9BYG5 372 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 ZNF341Q9BYN7 854 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 WDR11Q9BZH6 1224 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 UBXN6Q9BZV1 441 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 TSGA10Q9BZW7 698 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 TYW1Q9NV66 732 aaKnown RBP7.06□□□□□ -1.28
SPEN-204ENST00000471538 ARGLU1Q9NWB6 273 aaPredicted RBP7.06□□□□□ -1.28
SPEN-204ENST00000471538 MYO6Q9UM54 1294 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 PCDHA13Q9Y5I0 950 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.06□□□□□ -1.28
SPEN-204ENST00000471538 PHIPQ8WWQ0 1821 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 LOC285556D6RIA3 1793 aa7.06□□□□□ -1.28
SPEN-204ENST00000471538 NFIBO00712 420 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 DHX15O43143 795 aaKnown RBP7.05□□□□□ -1.28
SPEN-204ENST00000471538 CALUO43852 315 aaPredicted RBP7.05□□□□□ -1.28
SPEN-204ENST00000471538 GAS7O60861 476 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 AKAP3O75969 853 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 TBC1D8O95759 1140 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 PNMA6AP0CW24 399 aaPredicted RBP7.05□□□□□ -1.28
SPEN-204ENST00000471538 ERCC3P19447 782 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 GUCY2CP25092 1073 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 UBXN2AP68543 259 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 CYP27A1Q02318 531 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 KCNH2Q12809 1159 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 MAPK7Q13164 816 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 GRM1Q13255 1194 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 MFSD10Q14728 455 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 LAPTM4BQ86VI4 370 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 SAMD3Q8N6K7 520 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 PRPF38AQ8NAV1 312 aaKnown RBP7.05□□□□□ -1.28
SPEN-204ENST00000471538 IL31RAQ8NI17 732 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 NEK9Q8TD19 979 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 PIGOQ8TEQ8 1089 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 HOOK2Q96ED9 719 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 ZIC5Q96T25 663 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 RIT2Q99578 217 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 ZNF577Q9BSK1 485 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 STRA6Q9BX79 667 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 TEKT3Q9BXF9 490 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 TANGO6Q9C0B7 1094 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 NUCKS1Q9H1E3 243 aaKnown RBP7.05□□□□□ -1.28
SPEN-204ENST00000471538 SLC38A10Q9HBR0 1119 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 PLCB1Q9NQ66 1216 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 MAP3K20Q9NYL2 800 aaKnown RBP7.05□□□□□ -1.28
SPEN-204ENST00000471538 AIPL1Q9NZN9 384 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 KCND2Q9NZV8 630 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 SEL1LQ9UBV2 794 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 PUF60Q9UHX1 559 aaKnown RBP7.05□□□□□ -1.28
SPEN-204ENST00000471538 CCPG1Q9ULG6 757 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 UBIAD1Q9Y5Z9 338 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 DUSP10Q9Y6W6 482 aa7.05□□□□□ -1.28
SPEN-204ENST00000471538 ASTN2O75129 1339 aaPredicted RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 CTAGE15A4D2H0 777 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 CCDC151A5D8V7 595 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 IPO5O00410 1097 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 ENC1O14682 589 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 ZBTB39O15060 712 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 CHMP2AO43633 222 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 CTNND1O60716 968 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 TBCAO75347 108 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 SASH3O75995 380 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 SEC31AO94979 1220 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 LYPLA2O95372 231 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 IPO7O95373 1038 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 GCNT3O95395 438 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 AFPP02771 609 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 NR3C1P04150 777 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 SERPING1P05155 500 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 CTAGE8P0CG41 777 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 EPS15P42566 896 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 PLA2G4AP47712 749 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 CASP4P49662 377 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 POLR2FP61218 127 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 MRPS9P82933 396 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 APBA1Q02410 837 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 KCNA1Q09470 495 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 KIF5AQ12840 1032 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 ITGB3BPQ13352 177 aaPredicted RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 DGKZQ13574 1117 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 TNFAIP1Q13829 316 aa7.04□□□□□ -1.28
SPEN-204ENST00000471538 BMS1Q14692 1282 aaKnown RBP7.04□□□□□ -1.28
SPEN-204ENST00000471538 BRD3Q15059 726 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms