RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 ASAP3Q8TDY4 903 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 LMBR1Q8WVP7 490 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 CALML4Q96GE6 196 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 REEP2Q9BRK0 252 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 RNF208Q9H0X6 261 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 SETD4Q9NVD3 440 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 ERAP1Q9NZ08 941 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 SAMM50Q9Y512 469 aa11.02□□□□□ -0.65
SF3A1-207ENST00000471342 A0A1W2PQ45 241 aaPredicted RBP11.01□□□□□ -0.65
SF3A1-207ENST00000471342 A0A1W2PQY0 241 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 DNM1LO00429 736 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 NOP56O00567 594 aaKnown RBP11.01□□□□□ -0.65
SF3A1-207ENST00000471342 TREHO43280 583 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 RHOBTB3O94955 611 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 MYCP01106 439 aaPredicted RBP11.01□□□□□ -0.65
SF3A1-207ENST00000471342 CD4P01730 458 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 MYL3P08590 195 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 IQCF3P0C7M6 154 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 GLRA2P23416 452 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 KLRC1P26715 233 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 STK4Q13043 487 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 ZRSR1Q15695 479 aaKnown RBP11.01□□□□□ -0.65
SF3A1-207ENST00000471342 ZSCAN23Q3MJ62 389 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 KMT5BQ4FZB7 885 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 MTHFD1LQ6UB35 978 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 GPBP1Q86WP2 473 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 CKAP2LQ8IYA6 745 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 CNNM3Q8NE01 707 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 NTPCRQ9BSD7 190 aaKnown RBP11.01□□□□□ -0.65
SF3A1-207ENST00000471342 MTG1Q9BT17 334 aaPredicted RBP11.01□□□□□ -0.65
SF3A1-207ENST00000471342 AP5M1Q9H0R1 490 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 ADAMTS10Q9H324 1103 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 MAGEF1Q9HAY2 307 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 CDHR5Q9HBB8 845 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 CCDC39Q9UFE4 941 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 GTF2IRD1Q9UHL9 959 aa11.01□□□□□ -0.65
SF3A1-207ENST00000471342 PVALEFA0A1B0GWK0 134 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 MOXD2PA6NHM9 499 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 TTLL13PA6NNM8 815 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 PPP1R3GB7ZBB8 358 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 KPNA6O60684 536 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 HIP1RO75146 1068 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 GPR32O75388 356 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 HOXD11P31277 338 aaPredicted RBP11□□□□□ -0.65
SF3A1-207ENST00000471342 MGAT3Q09327 533 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 KCNA1Q09470 495 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 KCNB1Q14721 858 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 GRIK4Q16099 956 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 MTERF2Q49AM1 385 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 XKR9Q5GH70 373 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 ZNF484Q5JVG2 852 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 CCDC183Q5T5S1 534 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 FAM160B1Q5W0V3 765 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 UNC13DQ70J99 1090 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 SV2BQ7L1I2 683 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 DYMQ7RTS9 669 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 TRMT1LQ7Z2T5 733 aaKnown RBP11□□□□□ -0.65
SF3A1-207ENST00000471342 RPAINQ86UA6 219 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 GLG1Q92896 1179 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 TMEM143Q96AN5 459 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 CEP170P1Q96L14 293 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 HSD3B7Q9H2F3 369 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 COL1A2P08123 1366 aa11□□□□□ -0.65
SF3A1-207ENST00000471342 GOLGA6L4A6NEF3 574 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 GOLGA6L22H0YM25 854 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 ABLIM1O14639 778 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 USO1O60763 962 aaKnown RBP10.99□□□□□ -0.65
SF3A1-207ENST00000471342 DGAT1O75907 488 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 RPN1P04843 607 aaKnown RBP10.99□□□□□ -0.65
SF3A1-207ENST00000471342 EN2P19622 333 aaPredicted RBP10.99□□□□□ -0.65
SF3A1-207ENST00000471342 PMS1P54277 932 aaKnown RBP10.99□□□□□ -0.65
SF3A1-207ENST00000471342 ZNF445P59923 1031 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 RAD51AP2Q09MP3 1159 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 COASYQ13057 564 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 ITGA7Q13683 1181 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 DHX8Q14562 1220 aaKnown RBP10.99□□□□□ -0.65
SF3A1-207ENST00000471342 EMC2Q15006 297 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 AMHR2Q16671 573 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 COBLL1Q53SF7 1204 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 C1orf53Q5VUE5 145 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 NFRKBQ6P4R8 1299 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 SERINC5Q86VE9 423 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
SF3A1-207ENST00000471342 KSR1Q8IVT5 923 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 LRRC71Q8N4P6 559 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 TMEM161BQ8NDZ6 487 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 TMEM40Q8WWA1 233 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 CCDC113Q9H0I3 377 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 NUP62CLQ9H1M0 184 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 AZI2Q9H6S1 392 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 IFT122Q9HBG6 1241 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 NRBP2Q9NSY0 501 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 BMP2KQ9NSY1 1161 aaPredicted RBP10.99□□□□□ -0.65
SF3A1-207ENST00000471342 PCDH10Q9P2E7 1040 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 SEPT9Q9UHD8 586 aaPredicted RBP10.99□□□□□ -0.65
SF3A1-207ENST00000471342 GDAQ9Y2T3 454 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 PPME1Q9Y570 386 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 NRCAMQ92823 1304 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 ZMYM2Q9UBW7 1377 aa10.99□□□□□ -0.65
SF3A1-207ENST00000471342 ARHGEF35A5YM69 484 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms