RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 PRKD1Q15139 912 aaPredicted RBP7.94□□□□□ -1.14
COL11A1-208ENST00000470170 CRIP3Q6Q6R5 217 aa7.94□□□□□ -1.14
COL11A1-208ENST00000470170 SLC16A11Q8NCK7 471 aa7.94□□□□□ -1.14
COL11A1-208ENST00000470170 VPS11Q9H270 941 aa7.94□□□□□ -1.14
COL11A1-208ENST00000470170 SLC30A1Q9Y6M5 507 aa7.94□□□□□ -1.14
COL11A1-208ENST00000470170 TRAF5O00463 557 aa7.93□□□□□ -1.14
COL11A1-208ENST00000470170 ASLP04424 464 aa7.93□□□□□ -1.14
COL11A1-208ENST00000470170 ACO1P21399 889 aaKnown RBP7.93□□□□□ -1.14
COL11A1-208ENST00000470170 ARHGAP44Q17R89 818 aa7.93□□□□□ -1.14
COL11A1-208ENST00000470170 BCL6BQ8N143 479 aaPredicted RBP7.93□□□□□ -1.14
COL11A1-208ENST00000470170 FOXB1Q99853 325 aa7.93□□□□□ -1.14
COL11A1-208ENST00000470170 PTPDC1A2A3K4 754 aa7.92□□□□□ -1.14
COL11A1-208ENST00000470170 SDSP20132 328 aa7.92□□□□□ -1.14
COL11A1-208ENST00000470170 FNTBP49356 437 aa7.92□□□□□ -1.14
COL11A1-208ENST00000470170 RGS3P49796 1198 aa7.92□□□□□ -1.14
COL11A1-208ENST00000470170 HGFACQ04756 655 aa7.92□□□□□ -1.14
COL11A1-208ENST00000470170 CCDC144BQ3MJ40 725 aa7.92□□□□□ -1.14
COL11A1-208ENST00000470170 PIK3R6Q5UE93 754 aa7.92□□□□□ -1.14
COL11A1-208ENST00000470170 Q6ZSN1 163 aa7.92□□□□□ -1.14
COL11A1-208ENST00000470170 POLNQ7Z5Q5 900 aa7.92□□□□□ -1.14
COL11A1-208ENST00000470170 EDAQ92838 391 aa7.92□□□□□ -1.14
COL11A1-208ENST00000470170 SCAND2PQ9GZW5 306 aaPredicted RBP7.92□□□□□ -1.14
COL11A1-208ENST00000470170 MAGEL2Q9UJ55 1249 aa7.92□□□□□ -1.14
COL11A1-208ENST00000470170 ASMTLO95671 621 aa7.91□□□□□ -1.14
COL11A1-208ENST00000470170 PRLP01236 227 aa7.91□□□□□ -1.14
COL11A1-208ENST00000470170 SLC6A3Q01959 620 aa7.91□□□□□ -1.14
COL11A1-208ENST00000470170 MAP3K12Q12852 859 aa7.91□□□□□ -1.14
COL11A1-208ENST00000470170 ADAM15Q13444 863 aa7.91□□□□□ -1.14
COL11A1-208ENST00000470170 GPR135Q8IZ08 494 aa7.91□□□□□ -1.14
COL11A1-208ENST00000470170 PCIF1Q9H4Z3 704 aa7.91□□□□□ -1.14
COL11A1-208ENST00000470170 CABP5Q9NP86 173 aa7.91□□□□□ -1.14
COL11A1-208ENST00000470170 TMEM260Q9NX78 707 aa7.91□□□□□ -1.14
COL11A1-208ENST00000470170 MAFO75444 373 aaPredicted RBP7.9□□□□□ -1.14
COL11A1-208ENST00000470170 JMJD7P0C870 316 aa7.9□□□□□ -1.14
COL11A1-208ENST00000470170 RPS19P39019 145 aaKnown RBP7.9□□□□□ -1.14
COL11A1-208ENST00000470170 DRC1Q96MC2 740 aa7.9□□□□□ -1.14
COL11A1-208ENST00000470170 SRRDQ9UH36 339 aa7.9□□□□□ -1.14
COL11A1-208ENST00000470170 H7C1D1 291 aa7.89□□□□□ -1.15
COL11A1-208ENST00000470170 MSX2P35548 267 aaPredicted RBP7.89□□□□□ -1.15
COL11A1-208ENST00000470170 FOXL1Q12952 345 aa7.89□□□□□ -1.15
COL11A1-208ENST00000470170 USP39Q53GS9 565 aaKnown RBP7.89□□□□□ -1.15
COL11A1-208ENST00000470170 ZNF808Q8N4W9 903 aaPredicted RBP7.89□□□□□ -1.15
COL11A1-208ENST00000470170 KIAA1958Q8N8K9 716 aa7.89□□□□□ -1.15
COL11A1-208ENST00000470170 UBXN4Q92575 508 aa7.89□□□□□ -1.15
COL11A1-208ENST00000470170 PIF1Q9H611 641 aa7.89□□□□□ -1.15
COL11A1-208ENST00000470170 ACSS2Q9NR19 701 aa7.89□□□□□ -1.15
COL11A1-208ENST00000470170 UBA6A0AVT1 1052 aaPredicted RBP7.88□□□□□ -1.15
COL11A1-208ENST00000470170 CBX4O00257 560 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 SLC26A4O43511 780 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 PTX3P26022 381 aaPredicted RBP7.88□□□□□ -1.15
COL11A1-208ENST00000470170 STAT3P40763 770 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 RANGAP1P46060 587 aaPredicted RBP7.88□□□□□ -1.15
COL11A1-208ENST00000470170 ROM1Q03395 351 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 PABPC4Q13310 644 aaKnown RBP eCLIP7.88□□□□□ -1.15
COL11A1-208ENST00000470170 NRN1LQ496H8 165 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 CDCA2Q69YH5 1023 aaPredicted RBP7.88□□□□□ -1.15
COL11A1-208ENST00000470170 SLFN12LQ6IEE8 588 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 MAMDC4Q6UXC1 1216 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 RNF207Q6ZRF8 634 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 OR5AN1Q8NGI8 311 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 E2F7Q96AV8 911 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 TMEM176AQ96HP8 235 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 MAML3Q96JK9 1138 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 AGO3Q9H9G7 860 aaKnown RBP7.88□□□□□ -1.15
COL11A1-208ENST00000470170 PLA2G3Q9NZ20 509 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 B4GALT6Q9UBX8 382 aa7.88□□□□□ -1.15
COL11A1-208ENST00000470170 SLC9A1P19634 815 aa7.87□□□□□ -1.15
COL11A1-208ENST00000470170 GDF5P43026 501 aa7.87□□□□□ -1.15
COL11A1-208ENST00000470170 ANTXR2P58335 489 aa7.87□□□□□ -1.15
COL11A1-208ENST00000470170 ACAP1Q15027 740 aa7.87□□□□□ -1.15
COL11A1-208ENST00000470170 ZNF174Q15697 407 aa7.87□□□□□ -1.15
COL11A1-208ENST00000470170 UBE2R2Q712K3 238 aaPredicted RBP7.87□□□□□ -1.15
COL11A1-208ENST00000470170 SHCBP1Q8NEM2 672 aa7.87□□□□□ -1.15
COL11A1-208ENST00000470170 EXTL1Q92935 676 aa7.87□□□□□ -1.15
COL11A1-208ENST00000470170 FAM89AQ96GI7 184 aa7.87□□□□□ -1.15
COL11A1-208ENST00000470170 C16orf92Q96LL3 132 aa7.87□□□□□ -1.15
COL11A1-208ENST00000470170 MSL2Q9HCI7 577 aa7.87□□□□□ -1.15
COL11A1-208ENST00000470170 SAE1Q9UBE0 346 aaPredicted RBP7.87□□□□□ -1.15
COL11A1-208ENST00000470170 VWA7Q9Y334 891 aa7.87□□□□□ -1.15
COL11A1-208ENST00000470170 CTDP1Q9Y5B0 961 aaPredicted RBP7.87□□□□□ -1.15
COL11A1-208ENST00000470170 FZD7O75084 574 aa7.86□□□□□ -1.15
COL11A1-208ENST00000470170 FLT3P36888 993 aa7.86□□□□□ -1.15
COL11A1-208ENST00000470170 SAFB2Q14151 953 aaKnown RBP eCLIP7.86□□□□□ -1.15
COL11A1-208ENST00000470170 GRM7Q14831 915 aa7.86□□□□□ -1.15
COL11A1-208ENST00000470170 CFAP100Q494V2 611 aa7.86□□□□□ -1.15
COL11A1-208ENST00000470170 TTC38Q5R3I4 469 aa7.86□□□□□ -1.15
COL11A1-208ENST00000470170 PRAMEF9Q5VWM5 478 aa7.86□□□□□ -1.15
COL11A1-208ENST00000470170 KLHDC10Q6PID8 442 aa7.86□□□□□ -1.15
COL11A1-208ENST00000470170 ZFPM1Q8IX07 1006 aa7.86□□□□□ -1.15
COL11A1-208ENST00000470170 PLSCR1O15162 318 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 RFPL3O75679 317 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 CYP17A1P05093 508 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 ACVRL1P37023 503 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 ATP2C1P98194 919 aaPredicted RBP7.85□□□□□ -1.15
COL11A1-208ENST00000470170 FOXE3Q13461 319 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 RIN1Q13671 783 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 C21orf62-AS1Q17RA5 79 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 CREB3L3Q68CJ9 461 aa7.85□□□□□ -1.15
COL11A1-208ENST00000470170 ESRP1Q6NXG1 681 aaKnown RBP7.85□□□□□ -1.15
COL11A1-208ENST00000470170 RNPC3Q96LT9 517 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms