RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 FAM228AQ86W67 206 aa18.4■□□□□ 0.54
COL9A3-208ENST00000469802 OSMRQ99650 979 aa18.4■□□□□ 0.54
COL9A3-208ENST00000469802 PLVAPQ9BX97 442 aa18.4■□□□□ 0.54
COL9A3-208ENST00000469802 SLKQ9H2G2 1235 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-208ENST00000469802 NSUN3Q9H649 340 aaKnown RBP18.4■□□□□ 0.54
COL9A3-208ENST00000469802 KCNJ14Q9UNX9 436 aa18.4■□□□□ 0.54
COL9A3-208ENST00000469802 C9IYK1 514 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 GRM6O15303 877 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 CTDNEP1O95476 244 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 AK2P54819 239 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 TARBP2Q15633 366 aaKnown RBP18.39■□□□□ 0.53
COL9A3-208ENST00000469802 INF2Q27J81 1249 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 LEXMQ3ZCV2 418 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 TCEAL5Q5H9L2 206 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 ODR4Q5SWX8 454 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 TRMT1LQ7Z2T5 733 aaKnown RBP18.39■□□□□ 0.53
COL9A3-208ENST00000469802 METTL13Q8N6R0 699 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 P2RX5Q93086 422 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 PPP1R16BQ96T49 567 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 RGS18Q9NS28 235 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 C1orf112Q9NSG2 853 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 ST3GAL5Q9UNP4 418 aa18.39■□□□□ 0.53
COL9A3-208ENST00000469802 GPR182O15218 404 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 SLC37A4O43826 429 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 STBD1O95210 358 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 MMP1P03956 469 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 GATMP50440 423 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 DSC3Q14574 896 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 EFCAB12Q6NXP0 572 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 MIER3Q7Z3K6 550 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 ZNF710Q8N1W2 664 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 NEK9Q8TD19 979 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 CEP89Q96ST8 783 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 MAP7D2Q96T17 732 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 ADAM2Q99965 735 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 ADAMTS10Q9H324 1103 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 KCNMB3Q9NPA1 279 aa18.38■□□□□ 0.53
COL9A3-208ENST00000469802 DDX25Q9UHL0 483 aaKnown RBP18.38■□□□□ 0.53
COL9A3-208ENST00000469802 KCNA5P22460 613 aa18.37■□□□□ 0.53
COL9A3-208ENST00000469802 CAMK1Q14012 370 aa18.37■□□□□ 0.53
COL9A3-208ENST00000469802 ANKRD1Q15327 319 aa18.37■□□□□ 0.53
COL9A3-208ENST00000469802 SLC24A5Q71RS6 500 aa18.37■□□□□ 0.53
COL9A3-208ENST00000469802 LRRC71Q8N4P6 559 aa18.37■□□□□ 0.53
COL9A3-208ENST00000469802 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.37■□□□□ 0.53
COL9A3-208ENST00000469802 PABPC5Q96DU9 382 aaKnown RBP18.37■□□□□ 0.53
COL9A3-208ENST00000469802 NIFKQ9BYG3 293 aaKnown RBP18.37■□□□□ 0.53
COL9A3-208ENST00000469802 NRBP2Q9NSY0 501 aa18.37■□□□□ 0.53
COL9A3-208ENST00000469802 GJB4Q9NTQ9 266 aa18.37■□□□□ 0.53
COL9A3-208ENST00000469802 CCDC194A0A1B0GVG4 234 aa18.36■□□□□ 0.53
COL9A3-208ENST00000469802 DENND3A2RUS2 1198 aa18.36■□□□□ 0.53
COL9A3-208ENST00000469802 TMOD1P28289 359 aa18.36■□□□□ 0.53
COL9A3-208ENST00000469802 NLRP11P59045 1033 aaKnown RBP18.36■□□□□ 0.53
COL9A3-208ENST00000469802 PAN2Q504Q3 1202 aaKnown RBP18.36■□□□□ 0.53
COL9A3-208ENST00000469802 NAALADL2Q58DX5 795 aa18.36■□□□□ 0.53
COL9A3-208ENST00000469802 PPP4R3AQ6IN85 833 aa18.36■□□□□ 0.53
COL9A3-208ENST00000469802 NEK8Q86SG6 692 aa18.36■□□□□ 0.53
COL9A3-208ENST00000469802 OXER1Q8TDS5 423 aa18.36■□□□□ 0.53
COL9A3-208ENST00000469802 GTF3C6Q969F1 213 aa18.36■□□□□ 0.53
COL9A3-208ENST00000469802 VAV3Q9UKW4 847 aa18.36■□□□□ 0.53
COL9A3-208ENST00000469802 LRFN2Q9ULH4 789 aa18.36■□□□□ 0.53
COL9A3-208ENST00000469802 PLAGL2Q9UPG8 496 aa18.36■□□□□ 0.53
COL9A3-208ENST00000469802 AKT3Q9Y243 479 aa18.36■□□□□ 0.53
COL9A3-208ENST00000469802 IGKV6-21A0A0C4DH24 114 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 DTNBO60941 627 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 LARGE1O95461 756 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 ITGB1P05556 798 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 FDPSP14324 419 aaKnown RBP18.35■□□□□ 0.53
COL9A3-208ENST00000469802 GCFC2P16383 781 aaKnown RBP18.35■□□□□ 0.53
COL9A3-208ENST00000469802 XBP1P17861 261 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 EIF4BP23588 611 aaKnown RBP18.35■□□□□ 0.53
COL9A3-208ENST00000469802 GPC3P51654 580 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 FAM189BP81408 668 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 TBC1D8BQ0IIM8 1120 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 PPP2R5CQ13362 524 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 ME3Q16798 604 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 CTC1Q2NKJ3 1217 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 LETM2Q2VYF4 491 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 XKR3Q5GH77 459 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 ELAC1Q9H777 363 aaKnown RBP18.35■□□□□ 0.53
COL9A3-208ENST00000469802 ALG13Q9NP73 1137 aaKnown RBP18.35■□□□□ 0.53
COL9A3-208ENST00000469802 RNF216Q9NWF9 866 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-208ENST00000469802 TMEM161AQ9NX61 479 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 SEPT9Q9UHD8 586 aaPredicted RBP18.35■□□□□ 0.53
COL9A3-208ENST00000469802 PCDHB7Q9Y5E2 793 aa18.35■□□□□ 0.53
COL9A3-208ENST00000469802 TMEM150BA6NC51 233 aa18.34■□□□□ 0.53
COL9A3-208ENST00000469802 DNAJB1P25685 340 aa18.34■□□□□ 0.53
COL9A3-208ENST00000469802 DRP2Q13474 957 aa18.34■□□□□ 0.53
COL9A3-208ENST00000469802 TNFRSF25Q93038 417 aa18.34■□□□□ 0.53
COL9A3-208ENST00000469802 FAM20AQ96MK3 541 aa18.34■□□□□ 0.53
COL9A3-208ENST00000469802 ORC3Q9UBD5 711 aaPredicted RBP18.34■□□□□ 0.53
COL9A3-208ENST00000469802 EML1O00423 815 aa18.33■□□□□ 0.52
COL9A3-208ENST00000469802 TBX3O15119 743 aa18.33■□□□□ 0.52
COL9A3-208ENST00000469802 DARSP14868 501 aaKnown RBP18.33■□□□□ 0.52
COL9A3-208ENST00000469802 LTBRP36941 435 aa18.33■□□□□ 0.52
COL9A3-208ENST00000469802 HYAL1Q12794 435 aa18.33■□□□□ 0.52
COL9A3-208ENST00000469802 MTERF2Q49AM1 385 aa18.33■□□□□ 0.52
COL9A3-208ENST00000469802 EARS2Q5JPH6 523 aaKnown RBP18.33■□□□□ 0.52
COL9A3-208ENST00000469802 FAM102BQ5T8I3 360 aa18.33■□□□□ 0.52
COL9A3-208ENST00000469802 PIK3AP1Q6ZUJ8 805 aa18.33■□□□□ 0.52
COL9A3-208ENST00000469802 ANO5Q75V66 913 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms