RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 UPP2O95045 317 aa19.74■□□□□ 0.75
MRPL28-208ENST00000469744 CAVIN2O95810 425 aa19.74■□□□□ 0.75
MRPL28-208ENST00000469744 U2AF2P26368 475 aaKnown RBP eCLIP19.74■□□□□ 0.75
MRPL28-208ENST00000469744 INF2Q27J81 1249 aa19.74■□□□□ 0.75
MRPL28-208ENST00000469744 MTHFD1LQ6UB35 978 aa19.74■□□□□ 0.75
MRPL28-208ENST00000469744 CCDC73Q6ZRK6 1079 aa19.74■□□□□ 0.75
MRPL28-208ENST00000469744 RAD9AQ99638 391 aa19.74■□□□□ 0.75
MRPL28-208ENST00000469744 PHF20Q9BVI0 1012 aa19.74■□□□□ 0.75
MRPL28-208ENST00000469744 GABBR1Q9UBS5 961 aa19.74■□□□□ 0.75
MRPL28-208ENST00000469744 MTUS1Q9ULD2 1270 aa19.74■□□□□ 0.75
MRPL28-208ENST00000469744 PCDHA2Q9Y5H9 948 aa19.74■□□□□ 0.75
MRPL28-208ENST00000469744 HBP1O60381 514 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 GAS7O60861 476 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 NR1I2O75469 434 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 PSAPP07602 524 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 KLRC1P26715 233 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 NONOQ15233 471 aaKnown RBP eCLIP19.73■□□□□ 0.75
MRPL28-208ENST00000469744 FBXO47Q5MNV8 452 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 SMAP1Q8IYB5 467 aaPredicted RBP19.73■□□□□ 0.75
MRPL28-208ENST00000469744 RNF214Q8ND24 703 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 OXER1Q8TDS5 423 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 PCDHA10Q9Y5I2 948 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 ZBTB42B2RXF5 422 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 FAM160A1Q05DH4 1040 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 STK38Q15208 465 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 LRCH2Q5VUJ6 765 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 GALNT17Q6IS24 598 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 ENGASEQ8NFI3 743 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 APBB2Q92870 758 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 SLC5A5Q92911 643 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 UNC45AQ9H3U1 944 aa19.73■□□□□ 0.75
MRPL28-208ENST00000469744 AGO3Q9H9G7 860 aaKnown RBP19.73■□□□□ 0.75
MRPL28-208ENST00000469744 MAFBQ9Y5Q3 323 aaPredicted RBP19.73■□□□□ 0.75
MRPL28-208ENST00000469744 WDR64B1ANS9 1081 aa19.72■□□□□ 0.75
MRPL28-208ENST00000469744 DLL1O00548 723 aa19.72■□□□□ 0.75
MRPL28-208ENST00000469744 SPTLC2O15270 562 aa19.72■□□□□ 0.75
MRPL28-208ENST00000469744 CD52P31358 61 aa19.72■□□□□ 0.75
MRPL28-208ENST00000469744 ME1P48163 572 aa19.72■□□□□ 0.75
MRPL28-208ENST00000469744 CEBPZQ03701 1054 aaKnown RBP19.72■□□□□ 0.75
MRPL28-208ENST00000469744 UGCGQ16739 394 aa19.72■□□□□ 0.75
MRPL28-208ENST00000469744 TPRNQ4KMQ1 711 aa19.72■□□□□ 0.75
MRPL28-208ENST00000469744 KRT25Q7Z3Z0 450 aa19.72■□□□□ 0.75
MRPL28-208ENST00000469744 MRPS27Q92552 414 aaKnown RBP19.72■□□□□ 0.75
MRPL28-208ENST00000469744 DISC1Q9NRI5 854 aa19.72■□□□□ 0.75
MRPL28-208ENST00000469744 PCDHA7Q9UN72 937 aa19.72■□□□□ 0.75
MRPL28-208ENST00000469744 TRPV2Q9Y5S1 764 aa19.72■□□□□ 0.75
MRPL28-208ENST00000469744 COL1A2P08123 1366 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 SMIM35A0A1B0GVV1 85 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 LINC01553A4QN01 128 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 SLC37A4O43826 429 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 TYRO3Q06418 890 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 SLC39A14Q15043 492 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 SAFBQ15424 915 aaKnown RBP eCLIP19.71■□□□□ 0.75
MRPL28-208ENST00000469744 SF3A1Q15459 793 aaKnown RBP19.71■□□□□ 0.75
MRPL28-208ENST00000469744 LETM2Q2VYF4 491 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 Q4G0T1 1027 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 IER5Q5VY09 327 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 TSHZ1Q6ZSZ6 1077 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 FAM177A1Q8N128 213 aaPredicted RBP19.71■□□□□ 0.75
MRPL28-208ENST00000469744 GDPD5Q8WTR4 605 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 PPP1R16BQ96T49 567 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 RIT2Q99578 217 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 TEKT3Q9BXF9 490 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 GINS2Q9Y248 185 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 INSL6Q9Y581 213 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 CLIC4Q9Y696 253 aa19.71■□□□□ 0.75
MRPL28-208ENST00000469744 IGSF9BQ9UPX0 1349 aa19.71■□□□□ 0.74
MRPL28-208ENST00000469744 CYP3A7-CYP3A51PA0A087WV96 503 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 CCDC194A0A1B0GVG4 234 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 ESPNB1AK53 854 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 M0QZ92 97 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 ZNF862O60290 1169 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 PPP6R2O75170 966 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 PSMD10O75832 226 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 XBP1P17861 261 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 CYP3A7P24462 503 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 ZNF484Q5JVG2 852 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 PIK3AP1Q6ZUJ8 805 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 FSIP1Q8NA03 581 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 BBXQ8WY36 941 aaPredicted RBP19.7■□□□□ 0.74
MRPL28-208ENST00000469744 TOP1MTQ969P6 601 aa19.7■□□□□ 0.74
MRPL28-208ENST00000469744 FOXP1Q9H334 677 aaPredicted RBP19.7■□□□□ 0.74
MRPL28-208ENST00000469744 DDX25Q9UHL0 483 aaKnown RBP19.7■□□□□ 0.74
MRPL28-208ENST00000469744 FAM205CA6NFA0 338 aa19.69■□□□□ 0.74
MRPL28-208ENST00000469744 C22orf31O95567 290 aa19.69■□□□□ 0.74
MRPL28-208ENST00000469744 MMP1P03956 469 aa19.69■□□□□ 0.74
MRPL28-208ENST00000469744 HTRA4P83105 476 aaPredicted RBP19.69■□□□□ 0.74
MRPL28-208ENST00000469744 GRB10Q13322 594 aa19.69■□□□□ 0.74
MRPL28-208ENST00000469744 SNW1Q13573 536 aaKnown RBP19.69■□□□□ 0.74
MRPL28-208ENST00000469744 GNL2Q13823 731 aaKnown RBP19.69■□□□□ 0.74
MRPL28-208ENST00000469744 EARS2Q5JPH6 523 aaKnown RBP19.69■□□□□ 0.74
MRPL28-208ENST00000469744 SASS6Q6UVJ0 657 aa19.69■□□□□ 0.74
MRPL28-208ENST00000469744 KIAA0319LQ8IZA0 1049 aa19.69■□□□□ 0.74
MRPL28-208ENST00000469744 ETNPPLQ8TBG4 499 aa19.69■□□□□ 0.74
MRPL28-208ENST00000469744 FAM200AQ8TCP9 573 aa19.69■□□□□ 0.74
MRPL28-208ENST00000469744 MBOAT7Q96N66 472 aa19.69■□□□□ 0.74
MRPL28-208ENST00000469744 YME1L1Q96TA2 773 aa19.69■□□□□ 0.74
MRPL28-208ENST00000469744 C17orf80Q9BSJ5 609 aa19.69■□□□□ 0.74
MRPL28-208ENST00000469744 CELF4Q9BZC1 486 aaKnown RBP19.69■□□□□ 0.74
MRPL28-208ENST00000469744 CDHR5Q9HBB8 845 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms