RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 AMIGO3Q86WK7 504 aa7.77□□□□□ -1.17
PTCD3-208ENST00000469585 FAM177A1Q8N128 213 aaPredicted RBP7.77□□□□□ -1.17
PTCD3-208ENST00000469585 TTLL6Q8N841 843 aa7.77□□□□□ -1.17
PTCD3-208ENST00000469585 SHISA4Q96DD7 197 aa7.77□□□□□ -1.17
PTCD3-208ENST00000469585 RBM17Q96I25 401 aaKnown RBP7.77□□□□□ -1.17
PTCD3-208ENST00000469585 TRIM39Q9HCM9 518 aa7.77□□□□□ -1.17
PTCD3-208ENST00000469585 SFMBT1Q9UHJ3 866 aa7.77□□□□□ -1.17
PTCD3-208ENST00000469585 ADGRE2Q9UHX3 823 aa7.77□□□□□ -1.17
PTCD3-208ENST00000469585 ACSL6Q9UKU0 697 aa7.77□□□□□ -1.17
PTCD3-208ENST00000469585 HDAC5Q9UQL6 1122 aa7.77□□□□□ -1.17
PTCD3-208ENST00000469585 IBTKQ9P2D0 1353 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-208ENST00000469585 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-208ENST00000469585 IPO8O15397 1037 aaKnown RBP7.76□□□□□ -1.17
PTCD3-208ENST00000469585 NPHS1O60500 1241 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 EFCAB14O75071 495 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 CORO7P57737 925 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 GPR85P60893 370 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 PABPC4Q13310 644 aaKnown RBP eCLIP7.76□□□□□ -1.17
PTCD3-208ENST00000469585 TCIRG1Q13488 830 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 KIR3DS1Q14943 382 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 SLC14A2Q15849 920 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 KRT24Q2M2I5 525 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 GALNT18Q6P9A2 607 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 JAMLQ86YT9 394 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 IFNL3Q8IZI9 196 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 LILRA2Q8N149 483 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 C8orf58Q8NAV2 365 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 MYLIPQ8WY64 445 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 MASTLQ96GX5 879 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 IMPACTQ9P2X3 320 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 NDOR1Q9UHB4 597 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 FBXL7Q9UJT9 491 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 TAF6LQ9Y6J9 622 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 C10orf71Q711Q0 1435 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 ATP10DQ9P241 1426 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 SH3TC1Q8TE82 1336 aa7.76□□□□□ -1.17
PTCD3-208ENST00000469585 A0A0G2JLW4 131 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 AQP7O14520 342 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 ANXA1P04083 346 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 MSL3P1P0C860 447 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 RAC2P15153 192 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 NPR1P16066 1061 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 DPEP1P16444 411 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 MVKQ03426 396 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 DDR1Q08345 913 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 KSR2Q6VAB6 950 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 LBX2Q6XYB7 198 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 TTLL7Q6ZT98 887 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 DDX46Q7L014 1031 aaKnown RBP7.75□□□□□ -1.17
PTCD3-208ENST00000469585 BRAPQ7Z569 592 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 NLRX1Q86UT6 975 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 Q8N3U1 123 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 CCDC191Q8NCU4 936 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.75□□□□□ -1.171e-15■■□□□ 12.9
PTCD3-208ENST00000469585 SCLYQ96I15 445 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 SMC4Q9NTJ3 1288 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 CWC25Q9NXE8 425 aaPredicted RBP7.75□□□□□ -1.17
PTCD3-208ENST00000469585 GULP1Q9UBP9 304 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 PCDHA2Q9Y5H9 948 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 TIMM13Q9Y5L4 95 aaPredicted RBP7.75□□□□□ -1.17
PTCD3-208ENST00000469585 KIF16BQ96L93 1317 aa7.75□□□□□ -1.17
PTCD3-208ENST00000469585 BCORQ6W2J9 1755 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 YY1P25490 414 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 BCL6P41182 706 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 GTF2A2P52657 109 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 GYS2P54840 703 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 RPL11P62913 178 aaKnown RBP7.74□□□□□ -1.17
PTCD3-208ENST00000469585 SNX17Q15036 470 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 HLFQ16534 295 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 C21orf62-AS1Q17RA5 79 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 ALDH1L2Q3SY69 923 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 FYB2Q5VWT5 728 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 PRR5LQ6MZQ0 368 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 SLC4A10Q6U841 1118 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 ZNF662Q6ZS27 426 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 ATG4DQ86TL0 474 aaPredicted RBP7.74□□□□□ -1.17
PTCD3-208ENST00000469585 NLRP10Q86W26 655 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 Q8N1Y9 231 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 NINJ1Q92982 152 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 MYD88Q99836 296 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 MTA3Q9BTC8 594 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 CDIP1Q9H305 208 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 PLAAQ9Y263 795 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 MAP3K2Q9Y2U5 619 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 PTPRCP08575 1304 aa7.74□□□□□ -1.17
PTCD3-208ENST00000469585 PI4KAP2A4QPH2 592 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 MYO1BO43795 1136 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 CLSTN1O94985 981 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 CRTAMO95727 393 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 PRKCAP17252 672 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 AFMP43652 599 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 SLFN5Q08AF3 891 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 LSAMPQ13449 338 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 PROSER3Q2NL68 480 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 CCDC152Q4G0S7 254 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 FGD2Q7Z6J4 655 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 ZNF34Q8IZ26 560 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 TSPYL6Q8N831 410 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 PI4KAP1Q8N8J0 262 aa7.73□□□□□ -1.17
PTCD3-208ENST00000469585 NUP43Q8NFH3 380 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms