RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 MKNK1Q9BUB5 465 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 FGFBP2Q9BYJ0 223 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 EDEM3Q9BZQ6 932 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 ST6GALNAC4Q9H4F1 302 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 C17orf75Q9HAS0 396 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 GABBR1Q9UBS5 961 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 EXOC7Q9UPT5 735 aa10.28□□□□□ -0.76
SMC1A-205ENST00000469129 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMC1A-205ENST00000469129 CCL15-CCL14A0A0B4J2E2 113 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 ASB14A6NK59 587 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 BACH1O14867 736 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 DGAT1O75907 488 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 NMT1P30419 496 aaKnown RBP10.27□□□□□ -0.77
SMC1A-205ENST00000469129 GJA5P36382 358 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 FXR1P51114 621 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMC1A-205ENST00000469129 SMTNP53814 917 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 RTP1P59025 263 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 PRKCEQ02156 737 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 CNTN2Q02246 1040 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 GOLGA8FQ08AF8 430 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 GOLGA8DPQ0D2H9 430 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 MAPK7Q13164 816 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 CCL15Q16663 113 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 UGCGQ16739 394 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 XKR3Q5GH77 459 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 CEP135Q66GS9 1140 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 ABHD15Q6UXT9 468 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 NYAP1Q6ZVC0 841 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 ZNF720Q7Z2F6 126 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 NEK11Q8NG66 645 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 OR8K1Q8NGG5 319 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 FAM167AQ96KS9 214 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 ACCSQ96QU6 501 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 PARK7Q99497 189 aaKnown RBP10.27□□□□□ -0.77
SMC1A-205ENST00000469129 TTYH3Q9C0H2 523 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 GBP3Q9H0R5 595 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 NUCKS1Q9H1E3 243 aaKnown RBP10.27□□□□□ -0.77
SMC1A-205ENST00000469129 ATP6V0A4Q9HBG4 840 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 ZNF302Q9NR11 478 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 RBPJLQ9UBG7 517 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 ARMCX3Q9UH62 379 aaPredicted RBP10.27□□□□□ -0.77
SMC1A-205ENST00000469129 SEPT9Q9UHD8 586 aaPredicted RBP10.27□□□□□ -0.77
SMC1A-205ENST00000469129 PPP2R2CQ9Y2T4 447 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 R3HCC1Q9Y3T6 440 aaKnown RBP10.27□□□□□ -0.77
SMC1A-205ENST00000469129 PPME1Q9Y570 386 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 PAXBP1Q9Y5B6 917 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 MGAMO43451 1857 aa10.27□□□□□ -0.77
SMC1A-205ENST00000469129 TTC26A0AVF1 554 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 SOWAHBA6NEL2 793 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 USP27XA6NNY8 438 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 ZBTB39O15060 712 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 PPP1R37O75864 691 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 IPO7O95373 1038 aaKnown RBP10.26□□□□□ -0.77
SMC1A-205ENST00000469129 XRCC5P13010 732 aaKnown RBP10.26□□□□□ -0.77
SMC1A-205ENST00000469129 UBA1P22314 1058 aaKnown RBP10.26□□□□□ -0.77
SMC1A-205ENST00000469129 CYLC1P35663 651 aaPredicted RBP10.26□□□□□ -0.77
SMC1A-205ENST00000469129 NCKAP1LP55160 1127 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 DMP1Q13316 513 aaPredicted RBP10.26□□□□□ -0.77
SMC1A-205ENST00000469129 HSP90AA2PQ14568 343 aaPredicted RBP10.26□□□□□ -0.77
SMC1A-205ENST00000469129 WDR78Q5VTH9 848 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 SEPT14Q6ZU15 432 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 SYCP3Q8IZU3 236 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 DAW1Q8N136 415 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 GPRC5AQ8NFJ5 357 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 FIZ1Q96SL8 496 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 SIK3Q9Y2K2 1263 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 FRMD4BQ9Y2L6 1034 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 DAAM1Q9Y4D1 1078 aa10.26□□□□□ -0.77
SMC1A-205ENST00000469129 DNAJC25-GNG10A0A024R161 153 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 PDHXO00330 501 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 FARP2O94887 1054 aaPredicted RBP10.25□□□□□ -0.77
SMC1A-205ENST00000469129 CELF2O95319 508 aaKnown RBP10.25□□□□□ -0.77
SMC1A-205ENST00000469129 ATG7O95352 703 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 AFPP02771 609 aaKnown RBP10.25□□□□□ -0.77
SMC1A-205ENST00000469129 OATP04181 439 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 HOXD13P35453 343 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 PSMC2P35998 433 aaKnown RBP10.25□□□□□ -0.77
SMC1A-205ENST00000469129 RFC5P40937 340 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 CDK17Q00537 523 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 PPP2R5AQ15172 486 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 MEA1Q16626 185 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 FAM102BQ5T8I3 360 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 UTP14CQ5TAP6 766 aaKnown RBP10.25□□□□□ -0.77
SMC1A-205ENST00000469129 PLA2G4FQ68DD2 849 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 SWSAP1Q6NVH7 229 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 METTL7BQ6UX53 244 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 ANO5Q75V66 913 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 CYFIP1Q7L576 1253 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 CACNA2D4Q7Z3S7 1137 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 SLC9A9Q8IVB4 645 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 CCDC60Q8IWA6 550 aaPredicted RBP10.25□□□□□ -0.77
SMC1A-205ENST00000469129 C12orf56Q8IXR9 622 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 FAM186BQ8IYM0 893 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 ABRAQ8N0Z2 381 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 TXLNBQ8N3L3 684 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 KIF18AQ8NI77 898 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 MORC4Q8TE76 937 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 TMEM174Q8WUU8 243 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 SPIRE2Q8WWL2 714 aa10.25□□□□□ -0.77
SMC1A-205ENST00000469129 EEF2KMTQ96G04 330 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms