RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 CHST13Q8NET6 341 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 CHTF18Q8WVB6 975 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 C8orf49Q96NF6 230 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 LMF1Q96S06 567 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 TOMM22Q9NS69 142 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 THG1LQ9NWX6 298 aaKnown RBP5.6□□□□□ -1.51
GPNMB-207ENST00000468723 SMPD4Q9NXE4 827 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 Q9UFV3 132 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 FBXO10Q9UK96 956 aa5.6□□□□□ -1.51
GPNMB-207ENST00000468723 UBA6A0AVT1 1052 aaPredicted RBP5.59□□□□□ -1.51
GPNMB-207ENST00000468723 F2P00734 622 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 PRLP01236 227 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 APEX1P27695 318 aaKnown RBP5.59□□□□□ -1.51
GPNMB-207ENST00000468723 EIF4HQ15056 248 aaKnown RBP5.59□□□□□ -1.51
GPNMB-207ENST00000468723 PCOLCEQ15113 449 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 SPATS1Q496A3 300 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 PRAMEF9Q5VWM5 478 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 EGFLAMQ63HQ2 1017 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 CREB3L3Q68CJ9 461 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 SLFN13Q68D06 897 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 KIAA0907Q7Z7F0 614 aaPredicted RBP5.59□□□□□ -1.51
GPNMB-207ENST00000468723 CIR1Q86X95 450 aaPredicted RBP5.59□□□□□ -1.51
GPNMB-207ENST00000468723 RTKN2Q8IZC4 609 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 MFSD3Q96ES6 412 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 C16orf92Q96LL3 132 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 TUBGCP5Q96RT8 1024 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 FOXB1Q99853 325 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 KRTAP4-5Q9BYR2 181 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 MEGF9Q9H1U4 602 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 FAM184BQ9ULE4 1060 aa5.59□□□□□ -1.51
GPNMB-207ENST00000468723 APOL3O95236 402 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 CYP17A1P05093 508 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 MAGEA10P43363 369 aaPredicted RBP5.58□□□□□ -1.52
GPNMB-207ENST00000468723 MEOX1P50221 254 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 ICAM4Q14773 271 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 SEPT7Q16181 437 aaKnown RBP5.58□□□□□ -1.52
GPNMB-207ENST00000468723 ZMAT1Q5H9K5 638 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 TTC38Q5R3I4 469 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 TMEM200BQ69YZ2 307 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 SLFN12LQ6IEE8 588 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 ESRP1Q6NXG1 681 aaKnown RBP5.58□□□□□ -1.52
GPNMB-207ENST00000468723 TAX1BP1Q86VP1 789 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 GIMAP8Q8ND71 665 aaPredicted RBP5.58□□□□□ -1.52
GPNMB-207ENST00000468723 LEO1Q8WVC0 666 aaPredicted RBP5.58□□□□□ -1.52
GPNMB-207ENST00000468723 E2F7Q96AV8 911 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 NEIL1Q96FI4 390 aaPredicted RBP5.58□□□□□ -1.52
GPNMB-207ENST00000468723 MAML3Q96JK9 1138 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 SCYL1Q96KG9 808 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 SAMD11Q96NU1 681 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 GPR101Q96P66 508 aaPredicted RBP5.58□□□□□ -1.52
GPNMB-207ENST00000468723 C12orf65Q9H3J6 166 aaKnown RBP5.58□□□□□ -1.52
GPNMB-207ENST00000468723 CNOT11Q9UKZ1 510 aaKnown RBP5.58□□□□□ -1.52
GPNMB-207ENST00000468723 NR2E1Q9Y466 385 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 SPO11Q9Y5K1 396 aa5.58□□□□□ -1.52
GPNMB-207ENST00000468723 ENPP3O14638 875 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 MYCLP1P12525 358 aaPredicted RBP5.57□□□□□ -1.52
GPNMB-207ENST00000468723 POU3F2P20265 443 aaPredicted RBP5.57□□□□□ -1.52
GPNMB-207ENST00000468723 MRE11P49959 708 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 GYS2P54840 703 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 KRTAP10-2P60368 255 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 RAC3P60763 192 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 NFKB2Q00653 900 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 DSG1Q02413 1049 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 ROM1Q03395 351 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 TRIM68Q6AZZ1 485 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 AHI1Q8N157 1196 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 OR14K1Q8NGZ2 314 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 RTF1Q92541 710 aaKnown RBP5.57□□□□□ -1.52
GPNMB-207ENST00000468723 DPYSL5Q9BPU6 564 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 ORAI3Q9BRQ5 295 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 SEC61A2Q9H9S3 476 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.57□□□□□ -1.52
GPNMB-207ENST00000468723 PLAAQ9Y263 795 aa5.57□□□□□ -1.52
GPNMB-207ENST00000468723 ARHGAP6O43182 974 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 ADRB1P08588 477 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 SCNN1BP51168 640 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 KPNA1P52294 538 aaPredicted RBP5.56□□□□□ -1.52
GPNMB-207ENST00000468723 ANTXR2P58335 489 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 ADAM17P78536 824 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 MAP3K12Q12852 859 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 ADAM15Q13444 863 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 SART3Q15020 963 aaKnown RBP5.56□□□□□ -1.52
GPNMB-207ENST00000468723 ACAP1Q15027 740 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 EPHA7Q15375 998 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 AGBL4Q5VU57 503 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 ZNF585AQ6P3V2 769 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 USP30Q70CQ3 517 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 KIF18BQ86Y91 864 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 BCL6BQ8N143 479 aaPredicted RBP5.56□□□□□ -1.52
GPNMB-207ENST00000468723 PPM1KQ8N3J5 372 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 DEF6Q9H4E7 631 aa5.56□□□□□ -1.52
GPNMB-207ENST00000468723 A0A087X0B3 334 aa5.55□□□□□ -1.52
GPNMB-207ENST00000468723 LCHNA4D1U4 455 aa5.55□□□□□ -1.52
GPNMB-207ENST00000468723 MATN2O00339 956 aa5.55□□□□□ -1.52
GPNMB-207ENST00000468723 TGM5O43548 720 aa5.55□□□□□ -1.52
GPNMB-207ENST00000468723 FOXS1O43638 330 aa5.55□□□□□ -1.52
GPNMB-207ENST00000468723 PDE8AO60658 829 aa5.55□□□□□ -1.52
GPNMB-207ENST00000468723 CDC14BO60729 498 aa5.55□□□□□ -1.52
GPNMB-207ENST00000468723 IL2P60568 153 aa5.55□□□□□ -1.52
GPNMB-207ENST00000468723 MYBPC3Q14896 1274 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms