RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 PLAAQ9Y263 795 aa17.23■□□□□ 0.35
TSPAN4-211ENST00000468468 ASTN1O14525 1302 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 NDUFAB1O14561 156 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 GCNT3O95395 438 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 RPL13P26373 211 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 HSPA9P38646 679 aaKnown RBP17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 JAG1P78504 1218 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 TATDN1Q6P1N9 297 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 SIX2Q9NPC8 291 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 SPDYE3A6NKU9 549 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 RAD17O75943 681 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 NR1D1P20393 614 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 GJB7Q6PEY0 223 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 VPS36Q86VN1 386 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 METTL13Q8N6R0 699 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 PROCA1Q8NCQ7 364 aaPredicted RBP17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 SLC35C1Q96A29 364 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 RUSC1Q9BVN2 902 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 GCNT4Q9P109 453 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 PCDHB13Q9Y5F0 798 aa17.22■□□□□ 0.35
TSPAN4-211ENST00000468468 TBCAO75347 108 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 H2AFZP0C0S5 128 aa17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 GUCY1A3Q02108 690 aa17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 ICA1Q05084 483 aa17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 CEP85LQ5SZL2 805 aa17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 H2AFVQ71UI9 128 aa17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 PEX26Q7Z412 305 aa17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 ATP6V1G3Q96LB4 118 aa17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 FAM20AQ96MK3 541 aa17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 PGRMC1O00264 195 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 KCNA1Q09470 495 aa17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 IKQ13123 557 aaPredicted RBP17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 RRP1BQ14684 758 aaKnown RBP17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 BMT2Q1RMZ1 405 aa17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 FBXO11Q86XK2 927 aa17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 SUPT20HQ8NEM7 779 aa17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.21■□□□□ 0.35
TSPAN4-211ENST00000468468 CLRN2A0PK11 232 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 SFI1A8K8P3 1242 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 SLC16A3O15427 465 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 MSH4O15457 936 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 SREBF1P36956 1147 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 JAM2P57087 298 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 MCTP2Q6DN12 878 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 DDX42Q86XP3 938 aaKnown RBP eCLIP17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 LMBR1Q8WVP7 490 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.2■□□□□ 0.342e-12■□□□□ 9.2
TSPAN4-211ENST00000468468 FBXL5Q9UKA1 691 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 NOC2LQ9Y3T9 749 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 STK24Q9Y6E0 443 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 DDX3XO00571 662 aaKnown RBP eCLIP17.2■□□□□ 0.346e-7■■■□□ 17.4
TSPAN4-211ENST00000468468 SART1O43290 800 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 CPP00450 1065 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 TAL1P17542 331 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 LSP1P33241 339 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 LIG3P49916 1009 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 CUL1Q13616 776 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 ABCB5Q2M3G0 1257 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 TTLL6Q8N841 843 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 EIF1ADQ8N9N8 165 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 U2AF1L4Q8WU68 220 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 CALR3Q96L12 384 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 DDX47Q9H0S4 455 aaKnown RBP17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 ZNF277Q9NRM2 450 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 RGL1Q9NZL6 768 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 NENFQ9UMX5 172 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 RABGAP1Q9Y3P9 1069 aa17.2■□□□□ 0.34
TSPAN4-211ENST00000468468 HMGB1P1B2RPK0 211 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 TCP10L2B9ZVM9 353 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 F5H6K3 240 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 KRIT1O00522 736 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 GFPT2O94808 682 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 FOSP01100 380 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 ANXA13P27216 316 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 ECHS1P30084 290 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 KLRC3Q07444 240 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 EMC10Q5UCC4 262 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 CYP2W1Q8TAV3 490 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 CSRNP1Q96S65 589 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 EIF2AK1Q9BQI3 630 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 CLGNO14967 610 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 NPM3O75607 178 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 EYA4O95677 639 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 GH2P01242 217 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 ZBTB48P10074 688 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 HOXA13P31271 388 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 ZNF76P36508 570 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 TMEM179Q6ZVK1 233 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 DAAM2Q86T65 1068 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 BANK1Q8NDB2 785 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 C1orf131Q8NDD1 294 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 CENPHQ9H3R5 247 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 VAV3Q9UKW4 847 aa17.19■□□□□ 0.34
TSPAN4-211ENST00000468468 GOLGA6L10A6NI86 522 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 EML1O00423 815 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 HSD17B3P37058 310 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 B4GALNT4Q76KP1 1039 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 466.3 ms