RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 CCT6AP40227 531 aaKnown RBP12.34□□□□□ -0.43
MSH5-212ENST00000467319 LPIN1Q14693 890 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 EMC2Q15006 297 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 SLC39A14Q15043 492 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 TMEM119Q4V9L6 283 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 PLEKHG4Q58EX7 1191 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 FBXO47Q5MNV8 452 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 ZNF365Q70YC5 407 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 OTUD6AQ7L8S5 288 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 NME8Q8N427 588 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 LINC00301Q8NCQ3 95 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 PIGOQ8TEQ8 1089 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 CEP170P1Q96L14 293 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 XPNPEP1Q9NQW7 623 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 SQORQ9Y6N5 450 aa12.34□□□□□ -0.43
MSH5-212ENST00000467319 GAS2O43903 313 aaKnown RBP12.33□□□□□ -0.44
MSH5-212ENST00000467319 GPR32O75388 356 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 BAIAP3O94812 1187 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 VTNP04004 478 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 CDC25AP30304 524 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 TMEM62Q0P6H9 643 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 LRIT3Q3SXY7 679 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 XKR9Q5GH70 373 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 FOXD4L5Q5VV16 416 aaPredicted RBP12.33□□□□□ -0.44
MSH5-212ENST00000467319 IER5Q5VY09 327 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 KRT79Q5XKE5 535 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 ATL3Q6DD88 541 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 EFCAB12Q6NXP0 572 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 CNKSR3Q6P9H4 555 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 TSHZ1Q6ZSZ6 1077 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 DEFB128Q7Z7B8 93 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 RPUSD2Q8IZ73 545 aaKnown RBP12.33□□□□□ -0.44
MSH5-212ENST00000467319 ZNF710Q8N1W2 664 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 KCTD17Q8N5Z5 321 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 METTL13Q8N6R0 699 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 TMEM40Q8WWA1 233 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 FOXD4L4Q8WXT5 416 aaPredicted RBP12.33□□□□□ -0.44
MSH5-212ENST00000467319 SLC7A3Q8WY07 619 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 RNPC3Q96LT9 517 aaKnown RBP12.33□□□□□ -0.44
MSH5-212ENST00000467319 ZNF396Q96N95 335 aaPredicted RBP12.33□□□□□ -0.44
MSH5-212ENST00000467319 PNMA5Q96PV4 448 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 NACC1Q96RE7 527 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 MAP7D2Q96T17 732 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 JPH2Q9BR39 696 aaPredicted RBP12.33□□□□□ -0.44
MSH5-212ENST00000467319 CELF4Q9BZC1 486 aaKnown RBP12.33□□□□□ -0.44
MSH5-212ENST00000467319 ADAMTS10Q9H324 1103 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 SRPRBQ9Y5M8 271 aaKnown RBP12.33□□□□□ -0.44
MSH5-212ENST00000467319 SZT2Q5T011 3432 aa12.33□□□□□ -0.44
MSH5-212ENST00000467319 COL4A6Q14031 1691 aa12.32□□□□□ -0.44
MSH5-212ENST00000467319 DGAT1O75907 488 aa12.32□□□□□ -0.44
MSH5-212ENST00000467319 GHRP10912 638 aa12.32□□□□□ -0.44
MSH5-212ENST00000467319 TMOD1P28289 359 aa12.32□□□□□ -0.44
MSH5-212ENST00000467319 MARCKSP29966 332 aaPredicted RBP12.32□□□□□ -0.44
MSH5-212ENST00000467319 GPC3P51654 580 aa12.32□□□□□ -0.44
MSH5-212ENST00000467319 POLGP54098 1239 aaPredicted RBP12.32□□□□□ -0.44
MSH5-212ENST00000467319 GRB10Q13322 594 aa12.32□□□□□ -0.44
MSH5-212ENST00000467319 HABP4Q5JVS0 413 aaKnown RBP12.32□□□□□ -0.44
MSH5-212ENST00000467319 KCNK18Q7Z418 384 aa12.32□□□□□ -0.44
MSH5-212ENST00000467319 EXOC8Q8IYI6 725 aa12.32□□□□□ -0.44
MSH5-212ENST00000467319 USP38Q8NB14 1042 aa12.32□□□□□ -0.44
MSH5-212ENST00000467319 LRRC15Q8TF66 581 aa12.32□□□□□ -0.44
MSH5-212ENST00000467319 IFIH1Q9BYX4 1025 aaKnown RBP12.32□□□□□ -0.44
MSH5-212ENST00000467319 CSRNP2Q9H175 543 aa12.32□□□□□ -0.44
MSH5-212ENST00000467319 AGO3Q9H9G7 860 aaKnown RBP12.32□□□□□ -0.44
MSH5-212ENST00000467319 DDX19AQ9NUU7 478 aaKnown RBP12.32□□□□□ -0.44
MSH5-212ENST00000467319 CXXC1Q9P0U4 656 aaPredicted RBP12.32□□□□□ -0.44
MSH5-212ENST00000467319 CHD7Q9P2D1 2997 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 M0QZ92 97 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 PPP6R2O75170 966 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 FGBP02675 491 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 CRYBB1P53674 252 aaPredicted RBP12.31□□□□□ -0.44
MSH5-212ENST00000467319 CEBPZQ03701 1054 aaKnown RBP12.31□□□□□ -0.44
MSH5-212ENST00000467319 DNM1Q05193 864 aaKnown RBP12.31□□□□□ -0.44
MSH5-212ENST00000467319 KIZQ2M2Z5 673 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 OTOP2Q7RTS6 562 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 CABP7Q86V35 215 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 ZNF410Q86VK4 478 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 KRI1Q8N9T8 703 aaKnown RBP12.31□□□□□ -0.44
MSH5-212ENST00000467319 DBF4BQ8NFT6 615 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 APBB2Q92870 758 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 CCSER1Q9C0I3 900 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 SUGCTQ9HAC7 445 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 CDHR5Q9HBB8 845 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 ATP6V0A4Q9HBG4 840 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 SUCLA2Q9P2R7 463 aaPredicted RBP12.31□□□□□ -0.44
MSH5-212ENST00000467319 KIAA1024Q9UPX6 916 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 AKT3Q9Y243 479 aa12.31□□□□□ -0.44
MSH5-212ENST00000467319 CDH23Q9H251 3354 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 A0A087WWV3 80 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 ABHD14A-ACY1A0A1B0GW23 586 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 SPTLC2O15270 562 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 USO1O60763 962 aaKnown RBP12.3□□□□□ -0.44
MSH5-212ENST00000467319 EFCAB14O75071 495 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 EYA4O95677 639 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 ACTN1P12814 892 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 CD52P31358 61 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 DNM2P50570 870 aa12.3□□□□□ -0.44
MSH5-212ENST00000467319 NLRP11P59045 1033 aaKnown RBP12.3□□□□□ -0.44
MSH5-212ENST00000467319 WDR5P61964 334 aaKnown RBP12.3□□□□□ -0.44
MSH5-212ENST00000467319 STK38Q15208 465 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms