RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 PLA2G3Q9NZ20 509 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 ASB1Q9Y576 335 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 B3GALT1Q9Y5Z6 326 aa6.64□□□□□ -1.35
PRPF40A-205ENST00000467114 RASSF10A6NK89 507 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 NARSO43776 548 aaKnown RBP6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 ZNF202O95125 648 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 ACRV1P26436 265 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 ABHD18Q0P651 414 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 FHL2Q14192 279 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 GRAMD4Q6IC98 578 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 OVCH1Q7RTY7 1134 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 GPR135Q8IZ08 494 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 RTKN2Q8IZC4 609 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 ZNF808Q8N4W9 903 aaPredicted RBP6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 IL17DQ8TAD2 202 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 GBP4Q96PP9 640 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 CSRNP2Q9H175 543 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 NDOR1Q9UHB4 597 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 COQ6Q9Y2Z9 468 aa6.63□□□□□ -1.35
PRPF40A-205ENST00000467114 FOXP2O15409 715 aa6.62□□□□□ -1.35
PRPF40A-205ENST00000467114 RASGRP1O95267 797 aa6.62□□□□□ -1.35
PRPF40A-205ENST00000467114 MSX2P35548 267 aaPredicted RBP6.62□□□□□ -1.35
PRPF40A-205ENST00000467114 DGCR2P98153 550 aa6.62□□□□□ -1.35
PRPF40A-205ENST00000467114 LSM12Q3MHD2 195 aaKnown RBP6.62□□□□□ -1.35
PRPF40A-205ENST00000467114 AMER2Q8N7J2 671 aa6.62□□□□□ -1.35
PRPF40A-205ENST00000467114 SLC7A14Q8TBB6 771 aa6.62□□□□□ -1.35
PRPF40A-205ENST00000467114 CACTINQ8WUQ7 758 aaKnown RBP6.62□□□□□ -1.35
PRPF40A-205ENST00000467114 MAGEB10Q96LZ2 347 aaPredicted RBP6.62□□□□□ -1.35
PRPF40A-205ENST00000467114 NCOA5Q9HCD5 579 aaKnown RBP6.62□□□□□ -1.35
PRPF40A-205ENST00000467114 CADPSQ9ULU8 1353 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 PRAMEF22A3QJZ6 481 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 GOLGA6L22H0YM25 854 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 SLC26A4O43511 780 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 APPP05067 770 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 C1SP09871 688 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 TGFB2P61812 414 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 CRB2Q5IJ48 1285 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 KIAA0907Q7Z7F0 614 aaPredicted RBP6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 ADGRE4PQ86SQ3 457 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 BCL6BQ8N143 479 aaPredicted RBP6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 SCLYQ96I15 445 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 CLUHP3Q96NS8 147 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 MRPL4Q9BYD3 311 aaKnown RBP6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 TRIM39Q9HCM9 518 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 TLR9Q9NR96 1032 aa6.61□□□□□ -1.35
PRPF40A-205ENST00000467114 SLC12A8A0AV02 714 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 NPTXRO95502 500 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 KCNA6P17658 529 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 HIBADHP31937 336 aaKnown RBP6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 MCM7P33993 719 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 STAT5BP51692 787 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 GRM7Q14831 915 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 TKFCQ3LXA3 575 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 PLEKHG4Q58EX7 1191 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 CATSPEREQ5SY80 951 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 HIPK4Q8NE63 616 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 OR14K1Q8NGZ2 314 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 CALML6Q8TD86 181 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 PLEKHG4BQ96PX9 1271 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 ZNF703Q9H7S9 590 aaPredicted RBP6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 AURKAIP1Q9NWT8 199 aaPredicted RBP6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 VWA7Q9Y334 891 aa6.6□□□□□ -1.35
PRPF40A-205ENST00000467114 FAM83GA6ND36 823 aa6.59□□□□□ -1.35
PRPF40A-205ENST00000467114 PLD2O14939 933 aa6.59□□□□□ -1.35
PRPF40A-205ENST00000467114 PPP1R12AO14974 1030 aaPredicted RBP6.59□□□□□ -1.35
PRPF40A-205ENST00000467114 RFPL3O75679 317 aa6.59□□□□□ -1.35
PRPF40A-205ENST00000467114 APEX1P27695 318 aaKnown RBP6.59□□□□□ -1.35
PRPF40A-205ENST00000467114 PURAQ00577 322 aaKnown RBP6.59□□□□□ -1.35
PRPF40A-205ENST00000467114 FNDC3BQ53EP0 1204 aaKnown RBP6.59□□□□□ -1.35
PRPF40A-205ENST00000467114 OTOP1Q7RTM1 612 aa6.59□□□□□ -1.35
PRPF40A-205ENST00000467114 SHCBP1Q8NEM2 672 aa6.59□□□□□ -1.35
PRPF40A-205ENST00000467114 AGO3Q9H9G7 860 aaKnown RBP6.59□□□□□ -1.35
PRPF40A-205ENST00000467114 SFMBT1Q9UHJ3 866 aa6.59□□□□□ -1.35
PRPF40A-205ENST00000467114 TCRBV16S1A1N1A0A5B0 115 aa6.58□□□□□ -1.36
PRPF40A-205ENST00000467114 ZBTB48P10074 688 aaPredicted RBP6.58□□□□□ -1.36
PRPF40A-205ENST00000467114 HHEXQ03014 270 aa6.58□□□□□ -1.36
PRPF40A-205ENST00000467114 TMEM132BQ14DG7 1078 aa6.58□□□□□ -1.36
PRPF40A-205ENST00000467114 SDE2Q6IQ49 451 aa6.58□□□□□ -1.36
PRPF40A-205ENST00000467114 ABHD17CQ6PCB6 329 aa6.58□□□□□ -1.36
PRPF40A-205ENST00000467114 SYNPOQ8N3V7 929 aa6.58□□□□□ -1.36
PRPF40A-205ENST00000467114 FANCLQ9NW38 375 aa6.58□□□□□ -1.36
PRPF40A-205ENST00000467114 FAM184BQ9ULE4 1060 aa6.58□□□□□ -1.36
PRPF40A-205ENST00000467114 CTDP1Q9Y5B0 961 aaPredicted RBP6.58□□□□□ -1.36
PRPF40A-205ENST00000467114 HIP1RO75146 1068 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 ALDH6A1Q02252 535 aaKnown RBP6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 DPTQ07507 201 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 MAP3K12Q12852 859 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 TMEM177Q53S58 311 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 C16orf86Q6ZW13 317 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 BRAPQ7Z569 592 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 RTN4RL1Q86UN2 441 aaPredicted RBP6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 SGMS1Q86VZ5 419 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 HOMER1Q86YM7 354 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 APPBP2Q92624 585 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 RABGGTAQ92696 567 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 LPPQ93052 612 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 FOXRED1Q96CU9 486 aaPredicted RBP6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 CHFRQ96EP1 664 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 FOXB1Q99853 325 aa6.57□□□□□ -1.36
PRPF40A-205ENST00000467114 TRIM8Q9BZR9 551 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms