RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 KCTD17Q8N5Z5 321 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 LINC01465Q8N7H1 131 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 LEO1Q8WVC0 666 aaPredicted RBP16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 SLC7A3Q8WY07 619 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 SYMPKQ92797 1274 aaKnown RBP16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 SCLYQ96I15 445 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 SPATA32Q96LK8 384 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 PLIN2Q99541 437 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 DHX33Q9H6R0 707 aaKnown RBP16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 DNM3Q9UQ16 869 aa16.12■□□□□ 0.17
DNMT3A-208ENST00000466601 ARHGEF35A5YM69 484 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 RSPH10B2B2RC85 870 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 E9PMD0 336 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 EYA4O95677 639 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 CTSHP09668 335 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 RSPH10BP0C881 870 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 CSF2RAP15509 400 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 TXLNAP40222 546 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 MAGEA10P43363 369 aaPredicted RBP16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 ME1P48163 572 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 DNM2P50570 870 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 KARSQ15046 597 aaKnown RBP16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 TMEM119Q4V9L6 283 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 FAM26DQ5JW98 314 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 KCNK18Q7Z418 384 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 RASSF8Q8NHQ8 419 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 SCAND2PQ9GZW5 306 aaPredicted RBP16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 PCDHA7Q9UN72 937 aa16.11■□□□□ 0.17
DNMT3A-208ENST00000466601 M0QZ92 97 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 DGAT1O75907 488 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 PARNO95453 639 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 CHRNA1P02708 482 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 MRPS6P82932 125 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 FPGSQ05932 587 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 MGAT3Q09327 533 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 TMEM62Q0P6H9 643 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 PPIGQ13427 754 aaKnown RBP eCLIP16.1■□□□□ 0.176e-8■■□□□ 12
DNMT3A-208ENST00000466601 MKRN4PQ13434 485 aaPredicted RBP16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 DRP2Q13474 957 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 EMC2Q15006 297 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 AXDND1Q5T1B0 1012 aaPredicted RBP16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 IER5Q5VY09 327 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 MAP7D2Q96T17 732 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 MTRQ99707 1265 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 BHMT2Q9H2M3 363 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 ATP6V0A4Q9HBG4 840 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 BMP2KQ9NSY1 1161 aaPredicted RBP16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 CCDC39Q9UFE4 941 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 AKT3Q9Y243 479 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 CDY2AQ9Y6F7 541 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 LTBP2Q14767 1821 aa16.1■□□□□ 0.17
DNMT3A-208ENST00000466601 TNRC18O15417 2968 aaPredicted RBP16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 GAS2O43903 313 aaKnown RBP16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 USO1O60763 962 aaKnown RBP16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 VTNP04004 478 aa16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 PLCG1P19174 1290 aa16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 RFC2P35250 354 aa16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 GPNMBQ14956 572 aa16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 SHC4Q6S5L8 630 aa16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 PADI6Q6TGC4 694 aa16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 TMEM143Q96AN5 459 aa16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 GDF15Q99988 308 aa16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 CELF4Q9BZC1 486 aaKnown RBP16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 XPNPEP1Q9NQW7 623 aa16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 SUCLA2Q9P2R7 463 aaPredicted RBP16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 TRPV2Q9Y5S1 764 aa16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 EVPLQ92817 2033 aa16.09■□□□□ 0.17
DNMT3A-208ENST00000466601 NBNO60934 754 aa16.08■□□□□ 0.16
DNMT3A-208ENST00000466601 CYP11B2P19099 503 aa16.08■□□□□ 0.16
DNMT3A-208ENST00000466601 MBTPS1Q14703 1052 aa16.08■□□□□ 0.16
DNMT3A-208ENST00000466601 DEFB128Q7Z7B8 93 aa16.08■□□□□ 0.16
DNMT3A-208ENST00000466601 RPUSD2Q8IZ73 545 aaKnown RBP16.08■□□□□ 0.16
DNMT3A-208ENST00000466601 TCP11Q8WWU5 503 aa16.08■□□□□ 0.16
DNMT3A-208ENST00000466601 PPP1R16BQ96T49 567 aa16.08■□□□□ 0.16
DNMT3A-208ENST00000466601 GDPD2Q9HCC8 539 aa16.08■□□□□ 0.16
DNMT3A-208ENST00000466601 IL23AQ9NPF7 189 aa16.08■□□□□ 0.16
DNMT3A-208ENST00000466601 PDE4DIPQ5VU43 2346 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 GPR32O75388 356 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 SSBP05455 408 aaKnown RBP eCLIP16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 PLA2G4BP0C869 781 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 ACRP10323 421 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 EPHB4P54760 987 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 NLRP11P59045 1033 aaKnown RBP16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 KIZQ2M2Z5 673 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 PRPF38BQ5VTL8 546 aaKnown RBP16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 RRAGBQ5VZM2 374 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 ADALQ6DHV7 355 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 CCDC73Q6ZRK6 1079 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 MAEAQ7L5Y9 396 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 ZNF710Q8N1W2 664 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 SYT2Q8N9I0 419 aaPredicted RBP16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 MCPH1Q8NEM0 835 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 LRRC15Q8TF66 581 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 PSPC1Q8WXF1 523 aaKnown RBP16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 PANK2Q9BZ23 570 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 UBE2OQ9C0C9 1292 aaKnown RBP16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 CDHR5Q9HBB8 845 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 BLOC1S4Q9NUP1 217 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 GINS2Q9Y248 185 aa16.07■□□□□ 0.16
DNMT3A-208ENST00000466601 ARID2Q68CP9 1835 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms