RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 COG2Q14746 738 aa21.12■□□□□ 0.97
LIMS2-212ENST00000466410 KCTD19Q17RG1 926 aaPredicted RBP21.12■□□□□ 0.97
LIMS2-212ENST00000466410 C1orf186Q6ZWK4 172 aa21.12■□□□□ 0.97
LIMS2-212ENST00000466410 H2AFVQ71UI9 128 aa21.12■□□□□ 0.97
LIMS2-212ENST00000466410 FAM186BQ8IYM0 893 aa21.12■□□□□ 0.97
LIMS2-212ENST00000466410 ACTRT1Q8TDG2 376 aa21.12■□□□□ 0.97
LIMS2-212ENST00000466410 BCAS4Q8TDM0 211 aa21.12■□□□□ 0.97
LIMS2-212ENST00000466410 WHAMMQ8TF30 809 aa21.12■□□□□ 0.97
LIMS2-212ENST00000466410 U2AF1L4Q8WU68 220 aaKnown RBP21.12■□□□□ 0.97
LIMS2-212ENST00000466410 GTPBP10A4D1E9 387 aaKnown RBP21.12■□□□□ 0.97
LIMS2-212ENST00000466410 TMCO5BA8MYB1 307 aa21.12■□□□□ 0.97
LIMS2-212ENST00000466410 PIK3CDO00329 1044 aa21.12■□□□□ 0.97
LIMS2-212ENST00000466410 NPM3O75607 178 aaKnown RBP21.12■□□□□ 0.97
LIMS2-212ENST00000466410 CFBP00751 764 aa21.12■□□□□ 0.97
LIMS2-212ENST00000466410 MMP10P09238 476 aa21.12■□□□□ 0.97
LIMS2-212ENST00000466410 VPS36Q86VN1 386 aa21.12■□□□□ 0.97
LIMS2-212ENST00000466410 TAF1DQ9H5J8 278 aaPredicted RBP21.12■□□□□ 0.97
LIMS2-212ENST00000466410 ZNF219Q9P2Y4 722 aaPredicted RBP21.12■□□□□ 0.97
LIMS2-212ENST00000466410 ATP1A2P50993 1020 aa21.11■□□□□ 0.97
LIMS2-212ENST00000466410 UBXN2AP68543 259 aa21.11■□□□□ 0.97
LIMS2-212ENST00000466410 PDCLQ13371 301 aa21.11■□□□□ 0.97
LIMS2-212ENST00000466410 LRCH2Q5VUJ6 765 aa21.11■□□□□ 0.97
LIMS2-212ENST00000466410 PEX26Q7Z412 305 aa21.11■□□□□ 0.97
LIMS2-212ENST00000466410 SERPINA10Q9UK55 444 aa21.11■□□□□ 0.97
LIMS2-212ENST00000466410 EIF3DO15371 548 aaKnown RBP eCLIP21.11■□□□□ 0.97
LIMS2-212ENST00000466410 EVI5O60447 810 aa21.11■□□□□ 0.97
LIMS2-212ENST00000466410 ANXA13P27216 316 aa21.11■□□□□ 0.97
LIMS2-212ENST00000466410 PSMC2P35998 433 aaKnown RBP21.11■□□□□ 0.97
LIMS2-212ENST00000466410 ECE1P42892 770 aa21.11■□□□□ 0.97
LIMS2-212ENST00000466410 HLTFQ14527 1009 aaKnown RBP eCLIP21.11■□□□□ 0.97
LIMS2-212ENST00000466410 KIAA1755Q5JYT7 1200 aa21.11■□□□□ 0.97
LIMS2-212ENST00000466410 SLFN11Q7Z7L1 901 aa21.11■□□□□ 0.97
LIMS2-212ENST00000466410 OLIG1Q8TAK6 271 aa21.11■□□□□ 0.97
LIMS2-212ENST00000466410 NOC2LQ9Y3T9 749 aaKnown RBP21.11■□□□□ 0.97
LIMS2-212ENST00000466410 PGRMC1O00264 195 aaKnown RBP21.1■□□□□ 0.97
LIMS2-212ENST00000466410 PSMD10O75832 226 aa21.1■□□□□ 0.97
LIMS2-212ENST00000466410 ECHS1P30084 290 aa21.1■□□□□ 0.97
LIMS2-212ENST00000466410 FKBP1AP62942 108 aaKnown RBP21.1■□□□□ 0.97
LIMS2-212ENST00000466410 LNX1Q8TBB1 728 aaPredicted RBP21.1■□□□□ 0.97
LIMS2-212ENST00000466410 ISCUQ9H1K1 167 aa21.1■□□□□ 0.97
LIMS2-212ENST00000466410 TUFT1Q9NNX1 390 aa21.1■□□□□ 0.97
LIMS2-212ENST00000466410 STXBP5LQ9Y2K9 1186 aa21.1■□□□□ 0.97
LIMS2-212ENST00000466410 CLSTN1O94985 981 aa21.1■□□□□ 0.97
LIMS2-212ENST00000466410 FERP16591 822 aa21.1■□□□□ 0.97
LIMS2-212ENST00000466410 STAT1P42224 750 aa21.1■□□□□ 0.97
LIMS2-212ENST00000466410 SLC15A2Q16348 729 aa21.1■□□□□ 0.97
LIMS2-212ENST00000466410 MSL1Q68DK7 614 aa21.1■□□□□ 0.97
LIMS2-212ENST00000466410 DDX42Q86XP3 938 aaKnown RBP eCLIP21.1■□□□□ 0.97
LIMS2-212ENST00000466410 FIZ1Q96SL8 496 aa21.1■□□□□ 0.97
LIMS2-212ENST00000466410 DDX47Q9H0S4 455 aaKnown RBP21.1■□□□□ 0.97
LIMS2-212ENST00000466410 PARVGQ9HBI0 331 aa21.1■□□□□ 0.97
LIMS2-212ENST00000466410 SART1O43290 800 aaKnown RBP21.09■□□□□ 0.97
LIMS2-212ENST00000466410 MAGEA9P43362 315 aa21.09■□□□□ 0.97
LIMS2-212ENST00000466410 GALCP54803 685 aa21.09■□□□□ 0.97
LIMS2-212ENST00000466410 DAAM2Q86T65 1068 aa21.09■□□□□ 0.97
LIMS2-212ENST00000466410 CD302Q8IX05 232 aa21.09■□□□□ 0.97
LIMS2-212ENST00000466410 CSRNP1Q96S65 589 aa21.09■□□□□ 0.97
LIMS2-212ENST00000466410 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.09■□□□□ 0.97
LIMS2-212ENST00000466410 A0A0A6YYK5 440 aaPredicted RBP21.09■□□□□ 0.97
LIMS2-212ENST00000466410 HSPA9P38646 679 aaKnown RBP21.09■□□□□ 0.97
LIMS2-212ENST00000466410 FMO5P49326 533 aa21.09■□□□□ 0.97
LIMS2-212ENST00000466410 STAT2P52630 851 aa21.09■□□□□ 0.97
LIMS2-212ENST00000466410 GLYCTKQ8IVS8 523 aa21.09■□□□□ 0.97
LIMS2-212ENST00000466410 SLC30A5Q8TAD4 765 aa21.09■□□□□ 0.97
LIMS2-212ENST00000466410 PRMT6Q96LA8 375 aaPredicted RBP21.09■□□□□ 0.97
LIMS2-212ENST00000466410 WRAP73Q9P2S5 460 aaPredicted RBP21.09■□□□□ 0.97
LIMS2-212ENST00000466410 ATRNL1Q5VV63 1379 aa21.09■□□□□ 0.97
LIMS2-212ENST00000466410 SHTN1A0MZ66 631 aa21.08■□□□□ 0.97
LIMS2-212ENST00000466410 FAM170AA1A519 330 aa21.08■□□□□ 0.97
LIMS2-212ENST00000466410 F8VZ95 297 aa21.08■□□□□ 0.97
LIMS2-212ENST00000466410 ITGA4P13612 1032 aa21.08■□□□□ 0.97
LIMS2-212ENST00000466410 SOX5P35711 763 aa21.08■□□□□ 0.97
LIMS2-212ENST00000466410 NT5DC3Q86UY8 548 aa21.08■□□□□ 0.97
LIMS2-212ENST00000466410 ACER1Q8TDN7 264 aa21.08■□□□□ 0.97
LIMS2-212ENST00000466410 CALR3Q96L12 384 aaKnown RBP21.08■□□□□ 0.97
LIMS2-212ENST00000466410 SUCLA2Q9P2R7 463 aaPredicted RBP21.08■□□□□ 0.97
LIMS2-212ENST00000466410 INTUQ9ULD6 942 aa21.08■□□□□ 0.97
LIMS2-212ENST00000466410 PLAAQ9Y263 795 aa21.08■□□□□ 0.97
LIMS2-212ENST00000466410 PLSCR1O15162 318 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 CYP2J2P51589 502 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 PPP2R5CQ13362 524 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 DRAP1Q14919 205 aaPredicted RBP21.08■□□□□ 0.96
LIMS2-212ENST00000466410 CBWD6Q4V339 395 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 CBWD3Q5JTY5 395 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 CBWD5Q5RIA9 395 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 CCDC174Q6PII3 467 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 KCTD17Q8N5Z5 321 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 LMBR1Q8WVP7 490 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 SLC5A5Q92911 643 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 RNPC3Q96LT9 517 aaKnown RBP21.08■□□□□ 0.96
LIMS2-212ENST00000466410 OSGEPQ9NPF4 335 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 DNAJC12Q9UKB3 198 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 SLX4Q8IY92 1834 aa21.08■□□□□ 0.96
LIMS2-212ENST00000466410 ATP8B3O60423 1300 aa21.07■□□□□ 0.96
LIMS2-212ENST00000466410 KRIT1O00522 736 aa21.07■□□□□ 0.96
LIMS2-212ENST00000466410 PPP1R12BO60237 982 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-212ENST00000466410 ZNF720Q7Z2F6 126 aa21.07■□□□□ 0.96
LIMS2-212ENST00000466410 NEUROG2Q9H2A3 272 aa21.07■□□□□ 0.96
LIMS2-212ENST00000466410 EBAG9O00559 213 aa21.07■□□□□ 0.96
LIMS2-212ENST00000466410 ENTPD3O75355 529 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms