RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 TMEM40Q8WWA1 233 aa15.32■□□□□ 0.04
CHD3-207ENST00000466233 MSLNLQ96KJ4 702 aa15.32■□□□□ 0.04
CHD3-207ENST00000466233 ADAM2Q99965 735 aa15.32■□□□□ 0.04
CHD3-207ENST00000466233 ALG13Q9NP73 1137 aaKnown RBP15.32■□□□□ 0.04
CHD3-207ENST00000466233 CD207Q9UJ71 328 aa15.32■□□□□ 0.04
CHD3-207ENST00000466233 NAP1L2Q9ULW6 460 aaPredicted RBP15.32■□□□□ 0.04
CHD3-207ENST00000466233 CYP3A7-CYP3A51PA0A087WV96 503 aa15.31■□□□□ 0.04
CHD3-207ENST00000466233 DDX39AO00148 427 aaKnown RBP15.31■□□□□ 0.04
CHD3-207ENST00000466233 EIF4BP23588 611 aaKnown RBP15.31■□□□□ 0.04
CHD3-207ENST00000466233 CYP3A7P24462 503 aa15.31■□□□□ 0.04
CHD3-207ENST00000466233 PDIA3P30101 505 aaKnown RBP15.31■□□□□ 0.04
CHD3-207ENST00000466233 Q4G0T1 1027 aa15.31■□□□□ 0.04
CHD3-207ENST00000466233 TRIM22Q8IYM9 498 aa15.31■□□□□ 0.04
CHD3-207ENST00000466233 POF1BQ8WVV4 589 aa15.31■□□□□ 0.04
CHD3-207ENST00000466233 ZNF274Q96GC6 653 aaPredicted RBP15.31■□□□□ 0.04
CHD3-207ENST00000466233 MAP7D2Q96T17 732 aa15.31■□□□□ 0.04
CHD3-207ENST00000466233 TM6SF1Q9BZW5 370 aa15.31■□□□□ 0.04
CHD3-207ENST00000466233 CDHR5Q9HBB8 845 aa15.31■□□□□ 0.04
CHD3-207ENST00000466233 ATP6V0A4Q9HBG4 840 aa15.31■□□□□ 0.04
CHD3-207ENST00000466233 ZSWIM6Q9HCJ5 1215 aa15.31■□□□□ 0.04
CHD3-207ENST00000466233 DISC1Q9NRI5 854 aa15.31■□□□□ 0.04
CHD3-207ENST00000466233 MGEA5O60502 916 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 LAG3P18627 525 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 PLCB3Q01970 1234 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 TMEM266Q2M3C6 531 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 TMEM184AQ6ZMB5 413 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 RUFY3Q7L099 469 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 METTL13Q8N6R0 699 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 DAGLBQ8NCG7 672 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 SMRP1Q8NCR6 262 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 RASGRP4Q8TDF6 673 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 SLC5A5Q92911 643 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 PHKBQ93100 1093 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 TRAIPQ9BWF2 469 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 NIFKQ9BYG3 293 aaKnown RBP15.3■□□□□ 0.04
CHD3-207ENST00000466233 TMEM117Q9H0C3 514 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 ADAMTS10Q9H324 1103 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 GABBR1Q9UBS5 961 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 SAMM50Q9Y512 469 aa15.3■□□□□ 0.04
CHD3-207ENST00000466233 MSH4O15457 936 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 GAS7O60861 476 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 TBX10O75333 385 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 EOMESO95936 686 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 OATP04181 439 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 CPA1P15085 419 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 ZSCAN20P17040 1043 aaPredicted RBP15.29■□□□□ 0.04
CHD3-207ENST00000466233 DNAJB1P25685 340 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
CHD3-207ENST00000466233 PPM1AP35813 382 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 DLX2Q07687 328 aaPredicted RBP15.29■□□□□ 0.04
CHD3-207ENST00000466233 KIZQ2M2Z5 673 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 HERC4Q5GLZ8 1057 aaPredicted RBP15.29■□□□□ 0.04
CHD3-207ENST00000466233 EFCAB12Q6NXP0 572 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 B3GNT9Q6UX72 402 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 EP400NLQ6ZTU2 488 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 FAM228AQ86W67 206 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 CCDC136Q96JN2 1154 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 OSMRQ99650 979 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 TLR9Q9NR96 1032 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 CHST12Q9NRB3 414 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 PCDHA4Q9UN74 947 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 GINS2Q9Y248 185 aa15.29■□□□□ 0.04
CHD3-207ENST00000466233 M0R2N6 131 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 EDIL3O43854 480 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 PSMD10O75832 226 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 DEXIO95424 95 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 ATF7P17544 494 aaPredicted RBP15.28■□□□□ 0.04
CHD3-207ENST00000466233 NDUFV1P49821 464 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 NLRP11P59045 1033 aaKnown RBP15.28■□□□□ 0.04
CHD3-207ENST00000466233 NLRP5P59047 1200 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 TARBP2Q15633 366 aaKnown RBP15.28■□□□□ 0.04
CHD3-207ENST00000466233 PAN2Q504Q3 1202 aaKnown RBP15.28■□□□□ 0.04
CHD3-207ENST00000466233 CPLX2Q6PUV4 134 aaKnown RBP15.28■□□□□ 0.04
CHD3-207ENST00000466233 MBOAT7Q96N66 472 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 TEKT3Q9BXF9 490 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 SLC26A6Q9BXS9 759 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 NGRNQ9NPE2 291 aaKnown RBP15.28■□□□□ 0.04
CHD3-207ENST00000466233 DACT1Q9NYF0 836 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 CLEC1BQ9P126 229 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 RAPGEFL1Q9UHV5 662 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 PUF60Q9UHX1 559 aaKnown RBP15.28■□□□□ 0.04
CHD3-207ENST00000466233 PPME1Q9Y570 386 aa15.28■□□□□ 0.04
CHD3-207ENST00000466233 MYO7AQ13402 2215 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 IGKV6-21A0A0C4DH24 114 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 A0A0U1RQF3 1178 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 TBKBP1A7MCY6 615 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 RBAK-RBAKDNI3L0D1 243 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 FSCN2O14926 492 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 ZNF862O60290 1169 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 FGF18O76093 207 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 VTNP04004 478 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 SRGAP2BP0DMP2 458 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 DARSP14868 501 aaKnown RBP15.27■□□□□ 0.04
CHD3-207ENST00000466233 IRS1P35568 1242 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 PRKCEQ02156 737 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 SSRP1Q08945 709 aaKnown RBP15.27■□□□□ 0.04
CHD3-207ENST00000466233 TBC1D8BQ0IIM8 1120 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 CBX2Q14781 532 aaPredicted RBP15.27■□□□□ 0.04
CHD3-207ENST00000466233 XKR3Q5GH77 459 aa15.27■□□□□ 0.04
CHD3-207ENST00000466233 FAM102BQ5T8I3 360 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms