RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 ALAS1P13196 640 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 PRLRP16471 622 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 PSMC2P35998 433 aaKnown RBP17.84■□□□□ 0.45
SLX4-202ENST00000466154 PRELPP51888 382 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 MARSP56192 900 aaKnown RBP17.84■□□□□ 0.45
SLX4-202ENST00000466154 TRIM31Q9BZY9 425 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 LCMT1Q9UIC8 334 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 SPDYE2BA6NHP3 402 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 K7ENM7 598 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 SPDYE6P0CI01 402 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 EPHB4P54760 987 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 GRIPAP1Q4V328 841 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 MEI1Q5TIA1 1274 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 EPM2AIP1Q7L775 607 aaPredicted RBP17.84■□□□□ 0.45
SLX4-202ENST00000466154 DDX42Q86XP3 938 aaKnown RBP eCLIP17.84■□□□□ 0.45
SLX4-202ENST00000466154 IFT20Q8IY31 132 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 CHURC1Q8WUH1 139 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 ELMO3Q96BJ8 720 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 HSD17B14Q9BPX1 270 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 VIPAS39Q9H9C1 493 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 METTL14Q9HCE5 456 aaKnown RBP17.84■□□□□ 0.45
SLX4-202ENST00000466154 TCEAL9Q9UHQ7 104 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 TSKSQ9UJT2 592 aa17.84■□□□□ 0.45
SLX4-202ENST00000466154 FOCADQ5VW36 1801 aa17.83■□□□□ 0.45
SLX4-202ENST00000466154 RBAK-RBAKDNI3L0D1 243 aa17.83■□□□□ 0.45
SLX4-202ENST00000466154 EVI5O60447 810 aa17.83■□□□□ 0.45
SLX4-202ENST00000466154 CBWD6Q4V339 395 aa17.83■□□□□ 0.45
SLX4-202ENST00000466154 CBWD3Q5JTY5 395 aa17.83■□□□□ 0.45
SLX4-202ENST00000466154 CBWD5Q5RIA9 395 aa17.83■□□□□ 0.45
SLX4-202ENST00000466154 FLAD1Q8NFF5 587 aa17.83■□□□□ 0.45
SLX4-202ENST00000466154 POLR3CQ9BUI4 534 aaPredicted RBP17.83■□□□□ 0.45
SLX4-202ENST00000466154 OSGEPQ9NPF4 335 aa17.83■□□□□ 0.45
SLX4-202ENST00000466154 DNAJC12Q9UKB3 198 aa17.83■□□□□ 0.45
SLX4-202ENST00000466154 RAD51CO43502 376 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 H2AFZP0C0S5 128 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 MYCLP12524 364 aaPredicted RBP17.83■□□□□ 0.44
SLX4-202ENST00000466154 CIITAP33076 1130 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 STAT1P42224 750 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 SP4Q02446 784 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 DRAP1Q14919 205 aaPredicted RBP17.83■□□□□ 0.44
SLX4-202ENST00000466154 H2AFVQ71UI9 128 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 MAATS1Q7Z4T9 603 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 ZNF341Q9BYN7 854 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 WDR11Q9BZH6 1224 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 DDX47Q9H0S4 455 aaKnown RBP17.83■□□□□ 0.44
SLX4-202ENST00000466154 TMEM110-MUSTN1A8MSY1 372 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 HIP1RO75146 1068 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 PSMD10O75832 226 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 STYK1Q6J9G0 422 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 C1orf186Q6ZWK4 172 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 ARL8AQ96BM9 186 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 PPP1R1BQ9UD71 204 aaPredicted RBP17.83■□□□□ 0.44
SLX4-202ENST00000466154 TMX2Q9Y320 296 aa17.83■□□□□ 0.44
SLX4-202ENST00000466154 MRPL11Q9Y3B7 192 aaKnown RBP17.83■□□□□ 0.44
SLX4-202ENST00000466154 NFIBO00712 420 aa17.82■□□□□ 0.44
SLX4-202ENST00000466154 TEKT3Q9BXF9 490 aa17.82■□□□□ 0.44
SLX4-202ENST00000466154 TRIM66O15016 1216 aa17.82■□□□□ 0.44
SLX4-202ENST00000466154 CLSTN1O94985 981 aa17.82■□□□□ 0.44
SLX4-202ENST00000466154 EIF2AK2P19525 551 aaKnown RBP17.82■□□□□ 0.44
SLX4-202ENST00000466154 MIER3Q7Z3K6 550 aa17.82■□□□□ 0.44
SLX4-202ENST00000466154 HERC5Q9UII4 1024 aaKnown RBP17.82■□□□□ 0.44
SLX4-202ENST00000466154 LTBP1Q14766 1721 aa17.82■□□□□ 0.44
SLX4-202ENST00000466154 GOLGA8IPA6NC78 632 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 GOLGA8JA6NMD2 632 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 LLGL1Q15334 1064 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 CFAP58Q5T655 872 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 MCTP2Q6DN12 878 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 IL31RAQ8NI17 732 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 NACC1Q96RE7 527 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 CTDP1Q9Y5B0 961 aaPredicted RBP17.81■□□□□ 0.44
SLX4-202ENST00000466154 SLX4Q8IY92 1834 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 DDX3XO00571 662 aaKnown RBP eCLIP17.81■□□□□ 0.44
SLX4-202ENST00000466154 KIF4AO95239 1232 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 GAP43P17677 238 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 COPB2P35606 906 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 AARSP49588 968 aaKnown RBP eCLIP17.81■□□□□ 0.44
SLX4-202ENST00000466154 EN1Q05925 392 aaPredicted RBP17.81■□□□□ 0.44
SLX4-202ENST00000466154 RSBN1LQ6PCB5 846 aaPredicted RBP17.81■□□□□ 0.44
SLX4-202ENST00000466154 LRRC31Q6UY01 552 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 CASKIN2Q8WXE0 1202 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 ZIM3Q96PE6 472 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 MRIQ9BWK5 157 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 SIX2Q9NPC8 291 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 PSD3Q9NYI0 1048 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 PCDHGC5Q9Y5F6 944 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 ZC3H4Q9UPT8 1303 aaKnown RBP17.81■□□□□ 0.44
SLX4-202ENST00000466154 ZEB2O60315 1214 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 FMO5P49326 533 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 GALCP54803 685 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 NBPF9Q3BBW0 867 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 ZNF746Q6NUN9 644 aaPredicted RBP17.81■□□□□ 0.44
SLX4-202ENST00000466154 BTNL9Q6UXG8 535 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 VCPKMTQ9H867 229 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 RAVER2Q9HCJ3 691 aaKnown RBP17.81■□□□□ 0.44
SLX4-202ENST00000466154 AGPAT3Q9NRZ7 376 aa17.81■□□□□ 0.44
SLX4-202ENST00000466154 KRIT1O00522 736 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 PLSCR1O15162 318 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 INPP5BP32019 993 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 TNNC1P63316 161 aa17.8■□□□□ 0.44
SLX4-202ENST00000466154 ZNF720Q7Z2F6 126 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms