RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 GPR182O15218 404 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 DHX15O43143 795 aaKnown RBP11.74□□□□□ -0.53
GPNMB-206ENST00000465673 ST18O60284 1047 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 GPR32O75388 356 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 C22orf31O95567 290 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 CALM1P0DP23 149 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 CALM2P0DP24 149 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 CALM3P0DP25 149 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 ZNF76P36508 570 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 FUT2Q10981 343 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 JAKMIP3Q5VZ66 844 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 CREB3L3Q68CJ9 461 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 TMEM184AQ6ZMB5 413 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 ZBTB33Q86T24 672 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 METTL13Q8N6R0 699 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 MRPS27Q92552 414 aaKnown RBP11.74□□□□□ -0.53
GPNMB-206ENST00000465673 ATOH1Q92858 354 aaPredicted RBP11.74□□□□□ -0.53
GPNMB-206ENST00000465673 CASD1Q96PB1 797 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 ENTPD7Q9NQZ7 604 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 ZNF302Q9NR11 478 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 C1orf112Q9NSG2 853 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 TMEM161AQ9NX61 479 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 BRPF3Q9ULD4 1205 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 CNTNAP5Q8WYK1 1306 aa11.74□□□□□ -0.53
GPNMB-206ENST00000465673 LAG3P18627 525 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 SREBF1P36956 1147 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 SLC26A2P50443 739 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 CLCN3P51790 818 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 ADCY7P51828 1080 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 CRYBB1P53674 252 aaPredicted RBP11.73□□□□□ -0.53
GPNMB-206ENST00000465673 NECTIN1Q15223 517 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 PKN1Q16512 942 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 ZNF484Q5JVG2 852 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 FAM160B1Q5W0V3 765 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 KCNT2Q6UVM3 1135 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 PLA2G4DQ86XP0 818 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 CKAP2LQ8IYA6 745 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 C12orf76Q8N812 135 aaPredicted RBP11.73□□□□□ -0.53
GPNMB-206ENST00000465673 RNF169Q8NCN4 708 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 KREMEN2Q8NCW0 462 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 RIPOR3Q96MK2 946 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 CDCA3Q99618 268 aaPredicted RBP11.73□□□□□ -0.53
GPNMB-206ENST00000465673 MTA3Q9BTC8 594 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 POMKQ9H5K3 350 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 CFAP54Q96N23 3096 aa11.73□□□□□ -0.53
GPNMB-206ENST00000465673 COL1A2P08123 1366 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 IGLV3-22A0A075B6J6 115 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 C2CD4DB7Z1M9 353 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 NT5C1B-RDH14C9J2C7 533 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 BRD1O95696 1058 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 ASGR2P07307 311 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 FGFR4P22455 802 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 CLK2P49760 499 aaKnown RBP11.72□□□□□ -0.53
GPNMB-206ENST00000465673 NLRP11P59045 1033 aaKnown RBP11.72□□□□□ -0.53
GPNMB-206ENST00000465673 IRX6P78412 446 aaPredicted RBP11.72□□□□□ -0.53
GPNMB-206ENST00000465673 PLCB3Q01970 1234 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 CLLU1OSQ5K130 101 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 MIS18BP1Q6P0N0 1132 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 APOA5Q6Q788 366 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 TMC7Q7Z402 723 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 SGMS1Q86VZ5 419 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 LRRC71Q8N4P6 559 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 PRRX2Q99811 253 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 TMEM117Q9H0C3 514 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 FAM217BQ9NTX9 383 aaPredicted RBP11.72□□□□□ -0.53
GPNMB-206ENST00000465673 PUF60Q9UHX1 559 aaKnown RBP11.72□□□□□ -0.53
GPNMB-206ENST00000465673 LZTS1Q9Y250 596 aa11.72□□□□□ -0.53
GPNMB-206ENST00000465673 PTPRZ1P23471 2315 aaPredicted RBP11.72□□□□□ -0.53
GPNMB-206ENST00000465673 MYO10Q9HD67 2058 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 IPO5O00410 1097 aaKnown RBP11.71□□□□□ -0.53
GPNMB-206ENST00000465673 CSDE1O75534 798 aaKnown RBP11.71□□□□□ -0.53
GPNMB-206ENST00000465673 FOSP01100 380 aaPredicted RBP11.71□□□□□ -0.53
GPNMB-206ENST00000465673 CDC27P30260 824 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 RTN1Q16799 776 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 PDE12Q6L8Q7 609 aaKnown RBP11.71□□□□□ -0.53
GPNMB-206ENST00000465673 ASCL5Q7RTU5 278 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 ECHDC2Q86YB7 292 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 TMEM105Q8N8V8 129 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 RASGRP4Q8TDF6 673 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 AUTS2Q8WXX7 1259 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 ZNF558Q96NG5 402 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 ESYT1Q9BSJ8 1104 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 ADAMTS10Q9H324 1103 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 ELAC1Q9H777 363 aaKnown RBP11.71□□□□□ -0.53
GPNMB-206ENST00000465673 GABBR1Q9UBS5 961 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 MAFBQ9Y5Q3 323 aaPredicted RBP11.71□□□□□ -0.53
GPNMB-206ENST00000465673 HCFC2Q9Y5Z7 792 aa11.71□□□□□ -0.53
GPNMB-206ENST00000465673 C2orf71A6NGG8 1288 aa11.7□□□□□ -0.54
GPNMB-206ENST00000465673 CLASP2O75122 1294 aaKnown RBP11.7□□□□□ -0.54
GPNMB-206ENST00000465673 CA8P35219 290 aa11.7□□□□□ -0.54
GPNMB-206ENST00000465673 METAP2P50579 478 aaKnown RBP eCLIP11.7□□□□□ -0.54
GPNMB-206ENST00000465673 LONRF3Q496Y0 759 aa11.7□□□□□ -0.54
GPNMB-206ENST00000465673 ODR4Q5SWX8 454 aa11.7□□□□□ -0.54
GPNMB-206ENST00000465673 EFCAB12Q6NXP0 572 aa11.7□□□□□ -0.54
GPNMB-206ENST00000465673 SYNE3Q6ZMZ3 975 aa11.7□□□□□ -0.54
GPNMB-206ENST00000465673 NIPA1Q7RTP0 329 aa11.7□□□□□ -0.54
GPNMB-206ENST00000465673 TMEM173Q86WV6 379 aaPredicted RBP11.7□□□□□ -0.54
GPNMB-206ENST00000465673 SLC39A11Q8N1S5 342 aa11.7□□□□□ -0.54
GPNMB-206ENST00000465673 LINC01465Q8N7H1 131 aa11.7□□□□□ -0.54
GPNMB-206ENST00000465673 MRPL43Q8N983 215 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms