RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 DEFB128Q7Z7B8 93 aa22.66■■□□□ 1.22
PTCD3-206ENST00000465560 EXOC8Q8IYI6 725 aa22.66■■□□□ 1.22
PTCD3-206ENST00000465560 LINC00301Q8NCQ3 95 aa22.66■■□□□ 1.22
PTCD3-206ENST00000465560 CCDC43Q96MW1 224 aaKnown RBP22.66■■□□□ 1.22
PTCD3-206ENST00000465560 DHX33Q9H6R0 707 aaKnown RBP22.66■■□□□ 1.22
PTCD3-206ENST00000465560 SUGCTQ9HAC7 445 aa22.66■■□□□ 1.22
PTCD3-206ENST00000465560 DBR1Q9UK59 544 aaKnown RBP22.66■■□□□ 1.22
PTCD3-206ENST00000465560 SRPRBQ9Y5M8 271 aaKnown RBP22.66■■□□□ 1.22
PTCD3-206ENST00000465560 CDY2AQ9Y6F7 541 aa22.66■■□□□ 1.22
PTCD3-206ENST00000465560 MICAL3Q7RTP6 2002 aa22.65■■□□□ 1.22
PTCD3-206ENST00000465560 KDM3AQ9Y4C1 1321 aa22.65■■□□□ 1.22
PTCD3-206ENST00000465560 M0QZ92 97 aa22.65■■□□□ 1.22
PTCD3-206ENST00000465560 POLGP54098 1239 aaPredicted RBP22.65■■□□□ 1.22
PTCD3-206ENST00000465560 TMEM62Q0P6H9 643 aa22.65■■□□□ 1.22
PTCD3-206ENST00000465560 STK38Q15208 465 aa22.65■■□□□ 1.22
PTCD3-206ENST00000465560 HYIQ5T013 277 aa22.65■■□□□ 1.22
PTCD3-206ENST00000465560 SLC7A3Q8WY07 619 aa22.65■■□□□ 1.22
PTCD3-206ENST00000465560 MAP7D2Q96T17 732 aa22.65■■□□□ 1.22
PTCD3-206ENST00000465560 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.65■■□□□ 1.222e-9■□□□□ 11.3
PTCD3-206ENST00000465560 TFIP11Q9UBB9 837 aaKnown RBP22.65■■□□□ 1.22
PTCD3-206ENST00000465560 DAXXQ9UER7 740 aaPredicted RBP22.65■■□□□ 1.22
PTCD3-206ENST00000465560 KIAA1024Q9UPX6 916 aa22.65■■□□□ 1.22
PTCD3-206ENST00000465560 TRPV2Q9Y5S1 764 aa22.65■■□□□ 1.22
PTCD3-206ENST00000465560 TRIOBPQ9H2D6 2365 aa22.64■■□□□ 1.22
PTCD3-206ENST00000465560 A0A087WWV3 80 aa22.64■■□□□ 1.21
PTCD3-206ENST00000465560 A0A1W2PPC1 479 aa22.64■■□□□ 1.21
PTCD3-206ENST00000465560 SLC26A4O43511 780 aa22.64■■□□□ 1.21
PTCD3-206ENST00000465560 MKRN4PQ13434 485 aaPredicted RBP22.64■■□□□ 1.21
PTCD3-206ENST00000465560 TMEM240Q5SV17 173 aa22.64■■□□□ 1.21
PTCD3-206ENST00000465560 TDHQ8IZJ6 230 aa22.64■■□□□ 1.21
PTCD3-206ENST00000465560 DDX19AQ9NUU7 478 aaKnown RBP22.64■■□□□ 1.21
PTCD3-206ENST00000465560 AKT3Q9Y243 479 aa22.64■■□□□ 1.21
PTCD3-206ENST00000465560 LAMA3Q16787 3333 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 SPTLC2O15270 562 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 GAS2O43903 313 aaKnown RBP22.63■■□□□ 1.21
PTCD3-206ENST00000465560 PPP6R2O75170 966 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 DGAT1O75907 488 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 VTNP04004 478 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 NUCB2P80303 420 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 DNM1Q05193 864 aaKnown RBP22.63■■□□□ 1.21
PTCD3-206ENST00000465560 DRP2Q13474 957 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 EMC2Q15006 297 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 SHHQ15465 462 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 C9orf50Q5SZB4 431 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 ZNF365Q70YC5 407 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 CABP7Q86V35 215 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 ZNF710Q8N1W2 664 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 KRI1Q8N9T8 703 aaKnown RBP22.63■■□□□ 1.21
PTCD3-206ENST00000465560 CELF4Q9BZC1 486 aaKnown RBP22.63■■□□□ 1.21
PTCD3-206ENST00000465560 NT5C3AQ9H0P0 336 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 CSRNP2Q9H175 543 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 CFAP45Q9UL16 551 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 ATP6V1DQ9Y5K8 247 aa22.63■■□□□ 1.21
PTCD3-206ENST00000465560 FGBP02675 491 aa22.62■■□□□ 1.21
PTCD3-206ENST00000465560 UBA7P41226 1012 aa22.62■■□□□ 1.21
PTCD3-206ENST00000465560 DNM2P50570 870 aa22.62■■□□□ 1.21
PTCD3-206ENST00000465560 FBXO47Q5MNV8 452 aa22.62■■□□□ 1.21
PTCD3-206ENST00000465560 KCTD17Q8N5Z5 321 aa22.62■■□□□ 1.21
PTCD3-206ENST00000465560 PNMA5Q96PV4 448 aa22.62■■□□□ 1.21
PTCD3-206ENST00000465560 MTRQ99707 1265 aa22.62■■□□□ 1.21
PTCD3-206ENST00000465560 OSBPL7Q9BZF2 842 aa22.62■■□□□ 1.21
PTCD3-206ENST00000465560 SQORQ9Y6N5 450 aa22.62■■□□□ 1.21
PTCD3-206ENST00000465560 GPR32O75388 356 aa22.61■■□□□ 1.21
PTCD3-206ENST00000465560 GRB10Q13322 594 aa22.61■■□□□ 1.21
PTCD3-206ENST00000465560 ZRSR1Q15695 479 aaKnown RBP22.61■■□□□ 1.21
PTCD3-206ENST00000465560 PLEKHG4Q58EX7 1191 aa22.61■■□□□ 1.21
PTCD3-206ENST00000465560 CNKSR3Q6P9H4 555 aa22.61■■□□□ 1.21
PTCD3-206ENST00000465560 HERVK_113Q902F9 699 aa22.61■■□□□ 1.21
PTCD3-206ENST00000465560 CDK5RAP3Q96JB5 506 aa22.61■■□□□ 1.21
PTCD3-206ENST00000465560 CLIC6Q96NY7 704 aa22.61■■□□□ 1.21
PTCD3-206ENST00000465560 CCSER1Q9C0I3 900 aa22.61■■□□□ 1.21
PTCD3-206ENST00000465560 ATP6V0A4Q9HBG4 840 aa22.61■■□□□ 1.21
PTCD3-206ENST00000465560 XPNPEP1Q9NQW7 623 aa22.61■■□□□ 1.21
PTCD3-206ENST00000465560 BMP2KQ9NSY1 1161 aaPredicted RBP22.61■■□□□ 1.21
PTCD3-206ENST00000465560 SUCLA2Q9P2R7 463 aaPredicted RBP22.61■■□□□ 1.21
PTCD3-206ENST00000465560 DNM3Q9UQ16 869 aa22.61■■□□□ 1.21
PTCD3-206ENST00000465560 PTPRSQ13332 1948 aa22.61■■□□□ 1.21
PTCD3-206ENST00000465560 MYH11P35749 1972 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 ARHGEF35A5YM69 484 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 USO1O60763 962 aaKnown RBP22.6■■□□□ 1.21
PTCD3-206ENST00000465560 EYA4O95677 639 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 GHRP10912 638 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 ACTN1P12814 892 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 GPC3P51654 580 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 LPIN1Q14693 890 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 KIZQ2M2Z5 673 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 TMEM119Q4V9L6 283 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 TSHZ1Q6ZSZ6 1077 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 OTOP2Q7RTS6 562 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 USP38Q8NB14 1042 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 KCNG4Q8TDN1 519 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 TCP11Q8WWU5 503 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 CALML4Q96GE6 196 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 RNPC3Q96LT9 517 aaKnown RBP22.6■■□□□ 1.21
PTCD3-206ENST00000465560 PPP1R16BQ96T49 567 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 BHMT2Q9H2M3 363 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 GINS2Q9Y248 185 aa22.6■■□□□ 1.21
PTCD3-206ENST00000465560 E9PMD0 336 aa22.59■■□□□ 1.21
PTCD3-206ENST00000465560 CRYBB1P53674 252 aaPredicted RBP22.59■■□□□ 1.21
PTCD3-206ENST00000465560 NLRP11P59045 1033 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms