RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 FSTL1Q12841 308 aa4.5□□□□□ -1.69
CD55-207ENST00000465534 TUSC3Q13454 348 aa4.5□□□□□ -1.69
CD55-207ENST00000465534 CD276Q5ZPR3 534 aa4.5□□□□□ -1.69
CD55-207ENST00000465534 KRT27Q7Z3Y8 459 aa4.5□□□□□ -1.69
CD55-207ENST00000465534 C16orf71Q8IYS4 520 aaPredicted RBP4.5□□□□□ -1.69
CD55-207ENST00000465534 ZNF808Q8N4W9 903 aaPredicted RBP4.5□□□□□ -1.69
CD55-207ENST00000465534 AGAP2Q99490 1192 aa4.5□□□□□ -1.69
CD55-207ENST00000465534 PPARGC1AQ9UBK2 798 aaKnown RBP4.5□□□□□ -1.69
CD55-207ENST00000465534 DISP1Q96F81 1524 aa4.5□□□□□ -1.69
CD55-207ENST00000465534 KDM5AP29375 1690 aaKnown RBP4.5□□□□□ -1.69
CD55-207ENST00000465534 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.5□□□□□ -1.69
CD55-207ENST00000465534 FAM135AQ9P2D6 1515 aa4.5□□□□□ -1.69
CD55-207ENST00000465534 ZNF16P17020 682 aaPredicted RBP4.49□□□□□ -1.69
CD55-207ENST00000465534 DPY19L2P1Q6NXN4 242 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 ZNF627Q7L945 461 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 MRGPRGQ86SM5 289 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 ZNF483Q8TF39 744 aaPredicted RBP4.49□□□□□ -1.69
CD55-207ENST00000465534 C1orf159Q96HA4 380 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 PLA2G12BQ9BX93 195 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 NUB1Q9Y5A7 615 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 ARHGEF28Q8N1W1 1705 aaKnown RBP4.49□□□□□ -1.69
CD55-207ENST00000465534 BAHCC1Q9P281 2608 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 MEGF6O75095 1541 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 CLTCQ00610 1675 aaKnown RBP4.49□□□□□ -1.69
CD55-207ENST00000465534 ZNF839A8K0R7 811 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 MATN2O00339 956 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 MAKP20794 623 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 POLD1P28340 1107 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 LBX1P52954 281 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 DUSP8Q13202 625 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 C12orf65Q9H3J6 166 aaKnown RBP4.49□□□□□ -1.69
CD55-207ENST00000465534 NR2E1Q9Y466 385 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 DMRT1Q9Y5R6 373 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 NPFFR2Q9Y5X5 522 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 SETD5Q9C0A6 1442 aa4.49□□□□□ -1.69
CD55-207ENST00000465534 GLI3P10071 1580 aa4.48□□□□□ -1.69
CD55-207ENST00000465534 PTCH1Q13635 1447 aa4.48□□□□□ -1.69
CD55-207ENST00000465534 ESYT3A0FGR9 886 aa4.48□□□□□ -1.69
CD55-207ENST00000465534 MSCO60682 206 aa4.48□□□□□ -1.69
CD55-207ENST00000465534 COL6A2P12110 1019 aa4.48□□□□□ -1.69
CD55-207ENST00000465534 HIBADHP31937 336 aaKnown RBP4.48□□□□□ -1.69
CD55-207ENST00000465534 SLC35F1Q5T1Q4 408 aa4.48□□□□□ -1.69
CD55-207ENST00000465534 PCSK4Q6UW60 755 aa4.48□□□□□ -1.69
CD55-207ENST00000465534 C6orf15Q6UXA7 325 aaPredicted RBP4.48□□□□□ -1.69
CD55-207ENST00000465534 OTOP3Q7RTS5 596 aa4.48□□□□□ -1.69
CD55-207ENST00000465534 THEMISQ8N1K5 641 aaPredicted RBP4.48□□□□□ -1.69
CD55-207ENST00000465534 UBE2Q2Q8WVN8 375 aa4.48□□□□□ -1.69
CD55-207ENST00000465534 ANAPC16Q96DE5 110 aa4.48□□□□□ -1.69
CD55-207ENST00000465534 CLIP3Q96DZ5 547 aa4.48□□□□□ -1.69
CD55-207ENST00000465534 TELO2Q9Y4R8 837 aa4.48□□□□□ -1.69
CD55-207ENST00000465534 CROCC2H7BZ55 1655 aa4.47□□□□□ -1.69
CD55-207ENST00000465534 TET3O43151 1660 aa4.47□□□□□ -1.69
CD55-207ENST00000465534 ABCC5O15440 1437 aa4.47□□□□□ -1.69
CD55-207ENST00000465534 CUTAO60888 179 aa4.47□□□□□ -1.69
CD55-207ENST00000465534 TOP3AQ13472 1001 aaPredicted RBP4.47□□□□□ -1.69
CD55-207ENST00000465534 ZMAT1Q5H9K5 638 aa4.47□□□□□ -1.69
CD55-207ENST00000465534 LRRC59Q96AG4 307 aaKnown RBP4.47□□□□□ -1.69
CD55-207ENST00000465534 CAMKK2Q96RR4 588 aa4.47□□□□□ -1.69
CD55-207ENST00000465534 TLR9Q9NR96 1032 aa4.47□□□□□ -1.69
CD55-207ENST00000465534 REXO2Q9Y3B8 237 aaKnown RBP4.47□□□□□ -1.69
CD55-207ENST00000465534 B2RBV5 119 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 SCAMP3O14828 347 aaKnown RBP4.46□□□□□ -1.7
CD55-207ENST00000465534 SUSD5O60279 629 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 RAMP2O60895 175 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 LMO1P25800 156 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 MSX2P35548 267 aaPredicted RBP4.46□□□□□ -1.7
CD55-207ENST00000465534 GJA8P48165 433 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 FOXL1Q12952 345 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 TBR1Q16650 682 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.46□□□□□ -1.7
CD55-207ENST00000465534 UHMK1Q8TAS1 419 aaKnown RBP4.46□□□□□ -1.7
CD55-207ENST00000465534 VOPP1Q96AW1 172 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 SEC16BQ96JE7 1060 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 SLC39A2Q9NP94 309 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 STRIP2Q9ULQ0 834 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 EHBP1L1Q8N3D4 1523 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 TULP4Q9NRJ4 1543 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 PNPLA6Q8IY17 1366 aa4.46□□□□□ -1.7
CD55-207ENST00000465534 CICQ96RK0 1608 aaPredicted RBP4.46□□□□□ -1.7
CD55-207ENST00000465534 PRDM15P57071 1507 aaPredicted RBP4.45□□□□□ -1.7
CD55-207ENST00000465534 ACOT7O00154 380 aa4.45□□□□□ -1.7
CD55-207ENST00000465534 DNAJA1P31689 397 aaKnown RBP4.45□□□□□ -1.7
CD55-207ENST00000465534 RPS19P39019 145 aaKnown RBP4.45□□□□□ -1.7
CD55-207ENST00000465534 HOMEZQ8IX15 550 aa4.45□□□□□ -1.7
CD55-207ENST00000465534 FAM178BQ8IXR5 827 aa4.45□□□□□ -1.7
CD55-207ENST00000465534 ZNF703Q9H7S9 590 aaPredicted RBP4.45□□□□□ -1.7
CD55-207ENST00000465534 SLC2A4RGQ9NR83 387 aa4.45□□□□□ -1.7
CD55-207ENST00000465534 GPR27Q9NS67 375 aa4.45□□□□□ -1.7
CD55-207ENST00000465534 CEP72Q9P209 647 aa4.45□□□□□ -1.7
CD55-207ENST00000465534 UGGT1Q9NYU2 1555 aa4.45□□□□□ -1.7
CD55-207ENST00000465534 A0A0C4DFX4 3053 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 NKRFO15226 690 aaKnown RBP eCLIP4.44□□□□□ -1.7
CD55-207ENST00000465534 ARHGAP6O43182 974 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 GNAT1P11488 350 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 KRT4P19013 534 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 GRIA2P42262 883 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 SPIRE1Q08AE8 756 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 KCTD2Q14681 263 aa4.44□□□□□ -1.7
CD55-207ENST00000465534 DPP8Q6V1X1 898 aaPredicted RBP4.44□□□□□ -1.7
CD55-207ENST00000465534 METTL16Q86W50 562 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms