RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 KANK3Q6NY19 840 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 USP17L6PQ6QN14 398 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 METTL7BQ6UX53 244 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 MB21D2Q8IYB1 491 aaPredicted RBP11.17□□□□□ -0.62
USP39-212ENST00000465514 C12orf76Q8N812 135 aaPredicted RBP11.17□□□□□ -0.62
USP39-212ENST00000465514 SMARCC2Q8TAQ2 1214 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 MRPS27Q92552 414 aaKnown RBP11.17□□□□□ -0.62
USP39-212ENST00000465514 MAP4K1Q92918 833 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 MYL10Q9BUA6 226 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 NCDNQ9UBB6 729 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 TUBE1Q9UJT0 475 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 PADI3Q9ULW8 664 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 USTQ9Y2C2 406 aa11.17□□□□□ -0.62
USP39-212ENST00000465514 CNOT1A5YKK6 2376 aaKnown RBP11.17□□□□□ -0.62
USP39-212ENST00000465514 KRBA1A5PL33 1030 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 FIBPO43427 364 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 NARSO43776 548 aaKnown RBP11.16□□□□□ -0.62
USP39-212ENST00000465514 KINO60870 393 aaKnown RBP11.16□□□□□ -0.62
USP39-212ENST00000465514 SP4Q02446 784 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 PPFIA1Q13136 1202 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 PAK2Q13177 524 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 XRRA1Q6P2D8 792 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 ZNF654Q8IZM8 581 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 CTCFLQ8NI51 663 aaPredicted RBP11.16□□□□□ -0.62
USP39-212ENST00000465514 FEZF2Q8TBJ5 459 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 CUL5Q93034 780 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 COL26A1Q96A83 441 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 ZBTB10Q96DT7 871 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 RRP36Q96EU6 259 aaKnown RBP11.16□□□□□ -0.62
USP39-212ENST00000465514 MAP3K14Q99558 947 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 SPZ1Q9BXG8 430 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 TMX1Q9H3N1 280 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 LY9Q9HBG7 655 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 NGRNQ9NPE2 291 aaKnown RBP11.16□□□□□ -0.62
USP39-212ENST00000465514 TYW1Q9NV66 732 aaKnown RBP11.16□□□□□ -0.62
USP39-212ENST00000465514 FARP1Q9Y4F1 1045 aaPredicted RBP11.16□□□□□ -0.62
USP39-212ENST00000465514 PCDHB7Q9Y5E2 793 aa11.16□□□□□ -0.62
USP39-212ENST00000465514 RBM8AQ9Y5S9 174 aaKnown RBP11.16□□□□□ -0.62
USP39-212ENST00000465514 DOCK8Q8NF50 2099 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 MBLAC1A4D2B0 266 aaPredicted RBP11.15□□□□□ -0.62
USP39-212ENST00000465514 MEIS2O14770 477 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 DDAH1O94760 285 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 DCNP07585 359 aaKnown RBP11.15□□□□□ -0.62
USP39-212ENST00000465514 CFHP08603 1231 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 LAG3P18627 525 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 SMARCA1P28370 1054 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 KIF5BP33176 963 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 SARSP49591 514 aaKnown RBP11.15□□□□□ -0.62
USP39-212ENST00000465514 PLCB3Q01970 1234 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 LMNB2Q03252 620 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 TBC1D8BQ0IIM8 1120 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 TMEM62Q0P6H9 643 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 GRIK4Q16099 956 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 VARS2Q5ST30 1063 aaKnown RBP11.15□□□□□ -0.62
USP39-212ENST00000465514 MARCH8Q5T0T0 291 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 FAM102BQ5T8I3 360 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 PCNX4Q63HM2 1172 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 CASC1Q6TDU7 716 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 TMC7Q7Z402 723 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 SENP7Q9BQF6 1050 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 LZTS2Q9BRK4 669 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 RTKNQ9BST9 563 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 FAM49AQ9H0Q0 323 aaPredicted RBP11.15□□□□□ -0.62
USP39-212ENST00000465514 CWH43Q9H720 699 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 TBC1D17Q9HA65 648 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 KCNK12Q9HB15 430 aa11.15□□□□□ -0.62
USP39-212ENST00000465514 SEC63Q9UGP8 760 aaKnown RBP11.15□□□□□ -0.62
USP39-212ENST00000465514 PUF60Q9UHX1 559 aaKnown RBP11.15□□□□□ -0.62
USP39-212ENST00000465514 IGSF9BQ9UPX0 1349 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 C2orf71A6NGG8 1288 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 PRR5-ARHGAP8B1AHC4 643 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 PIK3CDO00329 1044 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 PRC1O43663 620 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 MGEA5O60502 916 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 CLASP2O75122 1294 aaKnown RBP11.14□□□□□ -0.63
USP39-212ENST00000465514 PLEKHA8P1O95397 391 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 MARK3P27448 753 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 PBX3P40426 434 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 IRX6P78412 446 aaPredicted RBP11.14□□□□□ -0.63
USP39-212ENST00000465514 ARHGAP8P85298 464 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 SMC1AQ14683 1233 aaKnown RBP11.14□□□□□ -0.63
USP39-212ENST00000465514 TMEM266Q2M3C6 531 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 ATAT1Q5SQI0 421 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 IER5Q5VY09 327 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 NFXL1Q6ZNB6 911 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 NLRX1Q86UT6 975 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 C1orf210Q8IVY1 113 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 CMTR1Q8N1G2 835 aaKnown RBP11.14□□□□□ -0.63
USP39-212ENST00000465514 SRBD1Q8N5C6 995 aaKnown RBP11.14□□□□□ -0.63
USP39-212ENST00000465514 GPR161Q8N6U8 529 aaKnown RBP11.14□□□□□ -0.63
USP39-212ENST00000465514 ACSF2Q96CM8 615 aaPredicted RBP11.14□□□□□ -0.63
USP39-212ENST00000465514 DLGAP2Q9P1A6 1054 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 CA14Q9ULX7 337 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 TRPV2Q9Y5S1 764 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 SQORQ9Y6N5 450 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 EVPLQ92817 2033 aa11.14□□□□□ -0.63
USP39-212ENST00000465514 RALGAPA1Q6GYQ0 2036 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 POTEMA6NI47 508 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 CCDC69A6NI79 296 aa11.13□□□□□ -0.63
USP39-212ENST00000465514 M0QZ92 97 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms