RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 GYPCP04921 128 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 MYCLP12524 364 aaPredicted RBP9.18□□□□□ -0.94
UBE4B-205ENST00000465408 PRKCSHP14314 528 aaPredicted RBP9.18□□□□□ -0.94
UBE4B-205ENST00000465408 ITGB5P18084 799 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 CASP14P31944 242 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 DSG3P32926 999 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 KCNJ6P48051 423 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 SETQ01105 290 aaPredicted RBP9.18□□□□□ -0.94
UBE4B-205ENST00000465408 PPP2R5CQ13362 524 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 GIT2Q14161 759 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 MTF1Q14872 753 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 SKIV2LQ15477 1246 aaKnown RBP9.18□□□□□ -0.94
UBE4B-205ENST00000465408 PTPN14Q15678 1187 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 HERC4Q5GLZ8 1057 aaPredicted RBP9.18□□□□□ -0.94
UBE4B-205ENST00000465408 NOL9Q5SY16 702 aaKnown RBP9.18□□□□□ -0.94
UBE4B-205ENST00000465408 MAP3K21Q5TCX8 1036 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 LHX8Q68G74 356 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 ITIH6Q6UXX5 1313 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 TOGARAM2Q6ZUX3 1019 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 FAM114A1Q8IWE2 563 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 TPH2Q8IWU9 490 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 NELFCDQ8IXH7 590 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 SYT2Q8N9I0 419 aaPredicted RBP9.18□□□□□ -0.94
UBE4B-205ENST00000465408 REPS2Q8NFH8 660 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 PIGOQ8TEQ8 1089 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 ZNF592Q92610 1267 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 C12orf42Q96LP6 360 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 CNTNAP3BQ96NU0 1288 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 TSG101Q99816 390 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 REEP2Q9BRK0 252 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 TUBGCP2Q9BSJ2 902 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 RUSC1Q9BVN2 902 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 TEKT3Q9BXF9 490 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 PBX4Q9BYU1 374 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 CNTNAP3Q9BZ76 1288 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 BCAS3Q9H6U6 928 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 POLD4Q9HCU8 107 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 KCND1Q9NSA2 647 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 TMOD4Q9NZQ9 345 aa9.18□□□□□ -0.94
UBE4B-205ENST00000465408 TRIM43BA6NCK2 446 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 RSPH10B2B2RC85 870 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 ARHGAP6O43182 974 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 SLITRK3O94933 977 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 TPM2P07951 284 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 TPM1P09493 284 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 RSPH10BP0C881 870 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 KLK7P49862 253 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 RPS6P62753 249 aaKnown RBP9.17□□□□□ -0.94
UBE4B-205ENST00000465408 GHRHRQ02643 423 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 BAATQ14032 418 aaPredicted RBP9.17□□□□□ -0.94
UBE4B-205ENST00000465408 EPHA7Q15375 998 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 TKFCQ3LXA3 575 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 SNRNP48Q6IEG0 339 aaKnown RBP9.17□□□□□ -0.94
UBE4B-205ENST00000465408 GPAT2Q6NUI2 795 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 RNF207Q6ZRF8 634 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 LRRC55Q6ZSA7 311 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 NYAP1Q6ZVC0 841 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 SFR1Q86XK3 245 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 ZNF507Q8TCN5 953 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 TRIB2Q92519 343 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 TRIM43Q96BQ3 446 aaPredicted RBP9.17□□□□□ -0.94
UBE4B-205ENST00000465408 PANX2Q96RD6 677 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 HSD17B14Q9BPX1 270 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 DESI2Q9BSY9 194 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 WDR11Q9BZH6 1224 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 BHMT2Q9H2M3 363 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 AGO4Q9HCK5 861 aaKnown RBP9.17□□□□□ -0.94
UBE4B-205ENST00000465408 TUFT1Q9NNX1 390 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 ATP11BQ9Y2G3 1177 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 RABGAP1Q9Y3P9 1069 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 RIPK3Q9Y572 518 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 PCDHA2Q9Y5H9 948 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.17□□□□□ -0.94
UBE4B-205ENST00000465408 UBIAD1Q9Y5Z9 338 aa9.17□□□□□ -0.94
UBE4B-205ENST00000465408 ACACBO00763 2458 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 TRANK1O15050 2925 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 FRMPD4Q14CM0 1322 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 FRMD3A2A2Y4 597 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 SOWAHDA6NJG2 315 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 GRXCR1A8MXD5 290 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 C19orf81C9J6K1 198 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 IPO5O00410 1097 aaKnown RBP9.16□□□□□ -0.94
UBE4B-205ENST00000465408 RIOK3O14730 519 aaKnown RBP9.16□□□□□ -0.94
UBE4B-205ENST00000465408 ZBTB39O15060 712 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 TBCAO75347 108 aaKnown RBP9.16□□□□□ -0.94
UBE4B-205ENST00000465408 MYBP10242 640 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 PRKAR2AP13861 404 aaKnown RBP9.16□□□□□ -0.94
UBE4B-205ENST00000465408 HOXA7P31268 230 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-205ENST00000465408 CASP5P51878 434 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 TERF1P54274 439 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 MRPS9P82933 396 aaKnown RBP9.16□□□□□ -0.94
UBE4B-205ENST00000465408 LRRC63Q05C16 580 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 ITGB3BPQ13352 177 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-205ENST00000465408 PGM5Q15124 567 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 SYCP1Q15431 976 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 ZCWPW2Q504Y3 356 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 MIIPQ5JXC2 388 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 PCNX4Q63HM2 1172 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 B3GNT9Q6UX72 402 aa9.16□□□□□ -0.94
UBE4B-205ENST00000465408 RAD9BQ6WBX8 426 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms