RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 PLS1Q14651 629 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 ODR4Q5SWX8 454 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 MEI1Q5TIA1 1274 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 FAM178BQ8IXR5 827 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 NACC1Q96RE7 527 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 MXRA8Q9BRK3 442 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 NAGPAQ9UK23 515 aa20.45■□□□□ 0.86
TSPAN4-210ENST00000464987 CYP2J2P51589 502 aa20.44■□□□□ 0.86
TSPAN4-210ENST00000464987 CXCL9Q07325 125 aa20.44■□□□□ 0.86
TSPAN4-210ENST00000464987 CPXCR1Q8N123 301 aa20.44■□□□□ 0.86
TSPAN4-210ENST00000464987 DAW1Q8N136 415 aa20.44■□□□□ 0.86
TSPAN4-210ENST00000464987 SH2D3AQ9BRG2 576 aa20.44■□□□□ 0.86
TSPAN4-210ENST00000464987 LUC7LQ9NQ29 371 aaKnown RBP20.44■□□□□ 0.86
TSPAN4-210ENST00000464987 SRCAPQ6ZRS2 3230 aa20.44■□□□□ 0.86
TSPAN4-210ENST00000464987 FAM170AA1A519 330 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 EGFRP00533 1210 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 PSMC2P35998 433 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 PAFAH1B1P43034 410 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 PDE4CQ08493 712 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 CBWD6Q4V339 395 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 CBWD3Q5JTY5 395 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 CBWD5Q5RIA9 395 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 FAM83AQ86UY5 434 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 KCTD17Q8N5Z5 321 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 AENQ8WTP8 325 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 HOOK2Q96ED9 719 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 VIPAS39Q9H9C1 493 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 HIP1RO75146 1068 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 TRIM49P0CI25 452 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 TRIM49CP0CI26 452 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 LMAN1P49257 510 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 HSD17B4P51659 736 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 SETQ01105 290 aaPredicted RBP20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 MAPK7Q13164 816 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 EHMT1Q9H9B1 1298 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 AGPAT3Q9NRZ7 376 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 KCNH7Q9NS40 1196 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 HOMER2Q9NSB8 354 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 ZNRF3Q9ULT6 936 aa20.43■□□□□ 0.86
TSPAN4-210ENST00000464987 GFPT2O94808 682 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 ICAM1P05362 532 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 ASNSP08243 561 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 PRKCIP41743 596 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 FKBP1CQ5VVH2 108 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 ALKBH5Q6P6C2 394 aaKnown RBP20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 RDH13Q8NBN7 331 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 FAM71BQ8TC56 605 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 CLEC4DQ8WXI8 215 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 EXOC4Q96A65 974 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 ZBED3Q96IU2 234 aaPredicted RBP20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 PHF20L1A8MW92 1017 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 TISP43B9A030 160 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 AGPSO00116 658 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 CFAP221Q4G0U5 840 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 HSP90B2PQ58FF3 399 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 BCS1LQ9Y276 419 aa20.42■□□□□ 0.86
TSPAN4-210ENST00000464987 ZSCAN5CA6NGD5 496 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 DHX15O43143 795 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 GGCXP38435 758 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 FMO5P49326 533 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 AARSP49588 968 aaKnown RBP eCLIP20.41■□□□□ 0.868e-6■■■■■ 52.4
TSPAN4-210ENST00000464987 ITGB3BPQ13352 177 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 MUM1L1Q5H9M0 696 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 CCDC70Q6NSX1 233 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 TRMT1LQ7Z2T5 733 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 NIM1KQ8IY84 436 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 MTMR14Q8NCE2 650 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 OLIG1Q8TAK6 271 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 TSKSQ9UJT2 592 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 FBXL5Q9UKA1 691 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 ARHGEF35A5YM69 484 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 TMEM150BA6NC51 233 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 DDX3XO00571 662 aaKnown RBP eCLIP20.41■□□□□ 0.861e-6■■■■□ 19.5
TSPAN4-210ENST00000464987 C8orf74Q6P047 294 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 SND1Q7KZF4 910 aaKnown RBP eCLIP20.41■□□□□ 0.865e-7■■■□□ 16.2
TSPAN4-210ENST00000464987 AGBL3Q8NEM8 1001 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 INPP4AQ96PE3 977 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 RAVER2Q9HCJ3 691 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 DMAC2Q9NW81 257 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 STIM2Q9P246 746 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 ODF2LQ9ULJ1 636 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 NENFQ9UMX5 172 aa20.41■□□□□ 0.86
TSPAN4-210ENST00000464987 GTPBP10A4D1E9 387 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-210ENST00000464987 RNF40O75150 1001 aa20.4■□□□□ 0.86
TSPAN4-210ENST00000464987 ALAS1P13196 640 aa20.4■□□□□ 0.86
TSPAN4-210ENST00000464987 MRPS9P82933 396 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-210ENST00000464987 MAP3K10Q02779 954 aa20.4■□□□□ 0.86
TSPAN4-210ENST00000464987 SPP2Q13103 211 aa20.4■□□□□ 0.86
TSPAN4-210ENST00000464987 RASA3Q14644 834 aa20.4■□□□□ 0.86
TSPAN4-210ENST00000464987 NFIL3Q16649 462 aa20.4■□□□□ 0.86
TSPAN4-210ENST00000464987 MIER3Q7Z3K6 550 aa20.4■□□□□ 0.86
TSPAN4-210ENST00000464987 SEL1LQ9UBV2 794 aa20.4■□□□□ 0.86
TSPAN4-210ENST00000464987 BZW2Q9Y6E2 419 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-210ENST00000464987 RPTORQ8N122 1335 aa20.4■□□□□ 0.86
TSPAN4-210ENST00000464987 EVI5O60447 810 aa20.39■□□□□ 0.86
TSPAN4-210ENST00000464987 PPP1R37O75864 691 aa20.39■□□□□ 0.86
TSPAN4-210ENST00000464987 GLI1P08151 1106 aa20.39■□□□□ 0.86
TSPAN4-210ENST00000464987 MUTP22033 750 aa20.39■□□□□ 0.86
TSPAN4-210ENST00000464987 GUCY2CP25092 1073 aa20.39■□□□□ 0.86
TSPAN4-210ENST00000464987 NOP2P46087 812 aaKnown RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms