RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 MED24O75448 989 aa13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 KRT18P05783 430 aaKnown RBP13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 ZSCAN20P17040 1043 aaPredicted RBP13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 CYP11B2P19099 503 aa13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 SLC12A3P55017 1021 aa13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 HERC4Q5GLZ8 1057 aaPredicted RBP13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 CATSPER3Q86XQ3 398 aa13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 CLEC4DQ8WXI8 215 aa13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 TBC1D5Q92609 795 aa13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 LENG9Q96B70 501 aa13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 ABHD8Q96I13 439 aa13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 CCDC42Q96M95 316 aa13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 PARD6BQ9BYG5 372 aa13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 EDEM3Q9BZQ6 932 aa13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 A1CFQ9NQ94 594 aaKnown RBP13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 MYO6Q9UM54 1294 aa13.33□□□□□ -0.28
SEC61A1-203ENST00000464451 FAM86B1E9PN63 330 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 CYP3A4P08684 503 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 FAM86B2P0C5J1 330 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 PNMA6AP0CW24 399 aaPredicted RBP13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 RPA1P27694 616 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 COPB2P35606 906 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 AMPD2Q01433 879 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 CNTN2Q02246 1040 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 IRF5Q13568 498 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 SPA17Q15506 151 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 KCTD17Q8N5Z5 321 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 JAKMIP2Q96AA8 810 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 UIMC1Q96RL1 719 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 APBA2Q99767 749 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 TSGA10Q9BZW7 698 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 EPC1Q9H2F5 836 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 MMRN2Q9H8L6 949 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 FAM207AQ9NSI2 230 aaPredicted RBP13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 TRIM10Q9UDY6 481 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 FBXO40Q9UH90 709 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 PUF60Q9UHX1 559 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 DNM3Q9UQ16 869 aa13.32□□□□□ -0.28
SEC61A1-203ENST00000464451 CTAGE15A4D2H0 777 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 POTEFA5A3E0 1075 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 CTAGE8P0CG41 777 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 GABPB1Q06547 395 aaPredicted RBP13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 BAATQ14032 418 aaPredicted RBP13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 BRD3Q15059 726 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 TKFCQ3LXA3 575 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 CCDC40Q4G0X9 1142 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 CC2D1AQ6P1N0 951 aaPredicted RBP13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 POTEGQ6S5H5 508 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 SLC30A10Q6XR72 485 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 CTAGE6Q86UF2 777 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 CTAGE4Q8IX94 777 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 ZSWIM4Q9H7M6 989 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 ARFGAP3Q9NP61 516 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 CCDC151A5D8V7 595 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 CCDC85CA6NKD9 419 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 OPLAHO14841 1288 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 INHAP05111 366 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 SPATA31C1P0DKV0 1188 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 CYP2C19P33261 490 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 VAV2P52735 878 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 MARSP56192 900 aaKnown RBP13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 KIF5AQ12840 1032 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 MTFR1Q15390 333 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 ARSHQ5FYA8 562 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 NCAPH2Q6IBW4 605 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 ABRAQ8N0Z2 381 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 SYT2Q8N9I0 419 aaPredicted RBP13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 SLAIN1Q8ND83 568 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 NEK11Q8NG66 645 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 SCFD1Q8WVM8 642 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 CYP39A1Q9NYL5 469 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 TBC1D7Q9P0N9 293 aa13.31□□□□□ -0.28
SEC61A1-203ENST00000464451 NPHP3-ACAD11A0A0J9YXS1 232 aa13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 EPHB6O15197 1021 aa13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 MSH4O15457 936 aa13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 HOXA13P31271 388 aaPredicted RBP13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 ZNF76P36508 570 aa13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 EDRF1Q3B7T1 1238 aa13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 ZNF792Q3KQV3 632 aa13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 RNF207Q6ZRF8 634 aa13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 TRAPPC11Q7Z392 1133 aa13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 ZC3H3Q8IXZ2 948 aaKnown RBP13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 MSANTD4Q8NCY6 345 aa13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 MAML3Q96JK9 1138 aa13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 NUCKS1Q9H1E3 243 aaKnown RBP13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 KCTD10Q9H3F6 313 aa13.3□□□□□ -0.28
SEC61A1-203ENST00000464451 DNAJC25-GNG10A0A024R161 153 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 CAPN15O75808 1086 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 LCA5LO95447 670 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 CFBP00751 764 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 TUBBP07437 444 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 XRCC5P13010 732 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 GIT2Q14161 759 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 PRAMEF19Q5SWL8 479 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 PAPD7Q5XG87 772 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 RRAGAQ7L523 313 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 CACNA2D4Q7Z3S7 1137 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 PXYLP1Q8TE99 480 aa13.29□□□□□ -0.28
SEC61A1-203ENST00000464451 POLR3CQ9BUI4 534 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms