RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 KCNV1Q6PIU1 500 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 ZNF467Q7Z7K2 595 aaPredicted RBP16.01■□□□□ 0.15
COL5A1-205ENST00000464187 CHP1Q99653 195 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 NOC4LQ9BVI4 516 aaKnown RBP16.01■□□□□ 0.15
COL5A1-205ENST00000464187 DIS3Q9Y2L1 958 aaKnown RBP16.01■□□□□ 0.15
COL5A1-205ENST00000464187 LUC7L2Q9Y383 392 aaKnown RBP16.01■□□□□ 0.15
COL5A1-205ENST00000464187 NPHP3-ACAD11A0A0J9YXS1 232 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 FARP2O94887 1054 aaPredicted RBP16.01■□□□□ 0.15
COL5A1-205ENST00000464187 ALDH1A1P00352 501 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 PSMC5P62195 406 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 RAD51AP2Q09MP3 1159 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 TBC1D8BQ0IIM8 1120 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 UGCGQ16739 394 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 ERCC6LQ2NKX8 1250 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 ZNF397Q8NF99 534 aaPredicted RBP16.01■□□□□ 0.15
COL5A1-205ENST00000464187 OR8K1Q8NGG5 319 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 MAML3Q96JK9 1138 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 DDX41Q9UJV9 622 aaKnown RBP16.01■□□□□ 0.15
COL5A1-205ENST00000464187 MRFAP1Q9Y605 127 aa16.01■□□□□ 0.15
COL5A1-205ENST00000464187 KIAA1217Q5T5P2 1943 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 PLXNB2O15031 1838 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 TADA3O75528 432 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 PSAPP07602 524 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 CACNB1Q02641 598 aaPredicted RBP16■□□□□ 0.15
COL5A1-205ENST00000464187 LRRC63Q05C16 580 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 LRRC41Q15345 812 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 MORN1Q5T089 497 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 MAMDC4Q6UXC1 1216 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 ABHD15Q6UXT9 468 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 LRRC55Q6ZSA7 311 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 C4orf19Q8IY42 314 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 NPLOC4Q8TAT6 608 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 ERGIC2Q96RQ1 377 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 CARD6Q9BX69 1037 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 PDGFCQ9NRA1 345 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 PANK4Q9NVE7 773 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 SLC5A4Q9NY91 659 aa16■□□□□ 0.15
COL5A1-205ENST00000464187 ZNFX1Q9P2E3 1918 aaKnown RBP16■□□□□ 0.15
COL5A1-205ENST00000464187 LYPLA2O95372 231 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 GGPS1O95749 300 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 KRT18P05783 430 aaKnown RBP15.99■□□□□ 0.15
COL5A1-205ENST00000464187 YWHABP31946 246 aaKnown RBP15.99■□□□□ 0.15
COL5A1-205ENST00000464187 RINT1Q6NUQ1 792 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 SWSAP1Q6NVH7 229 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 MIS18BP1Q6P0N0 1132 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 FBXO38Q6PIJ6 1188 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 WDR59Q6PJI9 974 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 FOXR2Q6PJQ5 311 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 NUP58Q9BVL2 599 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 RUSC1Q9BVN2 902 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.99■□□□□ 0.15
COL5A1-205ENST00000464187 GABBR1Q9UBS5 961 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 LRRC37A2A6NM11 1700 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 SYNGAP1Q96PV0 1343 aa15.99■□□□□ 0.15
COL5A1-205ENST00000464187 KIF5CO60282 957 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 ARHGAP25P42331 645 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 MAP2K5Q13163 448 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 GIT2Q14161 759 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 MEA1Q16626 185 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 ZCWPW2Q504Y3 356 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 FAM26FQ5R3K3 315 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 CCDC62Q6P9F0 684 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 METTL7BQ6UX53 244 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 TRMT1LQ7Z2T5 733 aaKnown RBP15.98■□□□□ 0.15
COL5A1-205ENST00000464187 CCDC60Q8IWA6 550 aaPredicted RBP15.98■□□□□ 0.15
COL5A1-205ENST00000464187 MYOCDQ8IZQ8 938 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 RETREG2Q8NC44 543 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 MNS1Q8NEH6 495 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 SCFD2Q8WU76 684 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 REEP2Q9BRK0 252 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 FGFBP2Q9BYJ0 223 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 MLXIPQ9HAP2 919 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 REXO2Q9Y3B8 237 aaKnown RBP15.98■□□□□ 0.15
COL5A1-205ENST00000464187 NDUFA10O95299 355 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 ATG7O95352 703 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 FGFR1OPO95684 399 aaKnown RBP15.98■□□□□ 0.15
COL5A1-205ENST00000464187 SNAI1O95863 264 aaPredicted RBP15.98■□□□□ 0.15
COL5A1-205ENST00000464187 ABL1P00519 1130 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 SUPT20HL2P0C7V6 817 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 TXNP10599 105 aaKnown RBP15.98■□□□□ 0.15
COL5A1-205ENST00000464187 TRIM21P19474 475 aaKnown RBP15.98■□□□□ 0.15
COL5A1-205ENST00000464187 TTLL4Q14679 1199 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 VWA3BQ502W6 1294 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 ARHGAP29Q52LW3 1261 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 FKBP15Q5T1M5 1219 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 C1orf186Q6ZWK4 172 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 CCDC65Q8IXS2 484 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 ATP6V0A1Q93050 837 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 TSG101Q99816 390 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 TINF2Q9BSI4 451 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 VTA1Q9NP79 307 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 AGPAT5Q9NUQ2 364 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 PCDHA2Q9Y5H9 948 aa15.98■□□□□ 0.15
COL5A1-205ENST00000464187 EPN1Q9Y6I3 576 aaPredicted RBP15.98■□□□□ 0.15
COL5A1-205ENST00000464187 FRMD3A2A2Y4 597 aa15.97■□□□□ 0.15
COL5A1-205ENST00000464187 ARHGEF35A5YM69 484 aa15.97■□□□□ 0.15
COL5A1-205ENST00000464187 TNPO2O14787 897 aaKnown RBP15.97■□□□□ 0.15
COL5A1-205ENST00000464187 BACH1O14867 736 aa15.97■□□□□ 0.15
COL5A1-205ENST00000464187 RARRES1P49788 294 aa15.97■□□□□ 0.15
COL5A1-205ENST00000464187 PPP2R3AQ06190 1150 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms