RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 AXDND1Q5T1B0 1012 aaPredicted RBP21.14■□□□□ 0.97
LMNB1-204ENST00000463908 LRRC8DQ7L1W4 858 aa21.14■□□□□ 0.97
LMNB1-204ENST00000463908 KCNK18Q7Z418 384 aa21.14■□□□□ 0.97
LMNB1-204ENST00000463908 CABP7Q86V35 215 aa21.14■□□□□ 0.97
LMNB1-204ENST00000463908 TMEM199Q8N511 208 aa21.14■□□□□ 0.97
LMNB1-204ENST00000463908 PLIN2Q99541 437 aa21.14■□□□□ 0.97
LMNB1-204ENST00000463908 DHX33Q9H6R0 707 aaKnown RBP21.14■□□□□ 0.97
LMNB1-204ENST00000463908 RSPH10B2B2RC85 870 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 E9PMD0 336 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 CAND2O75155 1236 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 CTSHP09668 335 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 RSPH10BP0C881 870 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 UBA7P41226 1012 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 CLCN3P51790 818 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 TMEM62Q0P6H9 643 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 NME8Q8N427 588 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 LRRC15Q8TF66 581 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 CCSER1Q9C0I3 900 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 CIZ1Q9ULV3 898 aaPredicted RBP21.13■□□□□ 0.97
LMNB1-204ENST00000463908 PPME1Q9Y570 386 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 ATP6V1DQ9Y5K8 247 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 LTBP2Q14767 1821 aa21.13■□□□□ 0.97
LMNB1-204ENST00000463908 NBNO60934 754 aa21.12■□□□□ 0.97
LMNB1-204ENST00000463908 FPGSQ05932 587 aa21.12■□□□□ 0.97
LMNB1-204ENST00000463908 ZRSR1Q15695 479 aaKnown RBP21.12■□□□□ 0.97
LMNB1-204ENST00000463908 TMEM119Q4V9L6 283 aa21.12■□□□□ 0.97
LMNB1-204ENST00000463908 PRO3102Q9H379 93 aa21.12■□□□□ 0.97
LMNB1-204ENST00000463908 CDHR5Q9HBB8 845 aa21.12■□□□□ 0.97
LMNB1-204ENST00000463908 XPNPEP1Q9NQW7 623 aa21.12■□□□□ 0.97
LMNB1-204ENST00000463908 PCDHA7Q9UN72 937 aa21.12■□□□□ 0.97
LMNB1-204ENST00000463908 ACRP10323 421 aa21.11■□□□□ 0.97
LMNB1-204ENST00000463908 RFC5P40937 340 aa21.11■□□□□ 0.97
LMNB1-204ENST00000463908 KRT85P78386 507 aa21.11■□□□□ 0.97
LMNB1-204ENST00000463908 MRPS6P82932 125 aaKnown RBP21.11■□□□□ 0.97
LMNB1-204ENST00000463908 KARSQ15046 597 aaKnown RBP21.11■□□□□ 0.97
LMNB1-204ENST00000463908 RSPH3Q86UC2 560 aa21.11■□□□□ 0.97
LMNB1-204ENST00000463908 KCNG4Q8TDN1 519 aa21.11■□□□□ 0.97
LMNB1-204ENST00000463908 LEO1Q8WVC0 666 aaPredicted RBP21.11■□□□□ 0.97
LMNB1-204ENST00000463908 SYMPKQ92797 1274 aaKnown RBP21.11■□□□□ 0.97
LMNB1-204ENST00000463908 IPO9Q96P70 1041 aaKnown RBP21.11■□□□□ 0.97
LMNB1-204ENST00000463908 BMP2KQ9NSY1 1161 aaPredicted RBP21.11■□□□□ 0.97
LMNB1-204ENST00000463908 DNM3Q9UQ16 869 aa21.11■□□□□ 0.97
LMNB1-204ENST00000463908 CDY2AQ9Y6F7 541 aa21.11■□□□□ 0.97
LMNB1-204ENST00000463908 SLC26A4O43511 780 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 CUTAO60888 179 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 GPR32O75388 356 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 EYA4O95677 639 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 VTNP04004 478 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 TMOD1P28289 359 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 BMP8BP34820 402 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 POLGP54098 1239 aaPredicted RBP21.1■□□□□ 0.97
LMNB1-204ENST00000463908 IER5Q5VY09 327 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 SHC4Q6S5L8 630 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 DEFB128Q7Z7B8 93 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 SLC7A3Q8WY07 619 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 TMEM143Q96AN5 459 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 CELF4Q9BZC1 486 aaKnown RBP21.1■□□□□ 0.97
LMNB1-204ENST00000463908 BHMT2Q9H2M3 363 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 IL23AQ9NPF7 189 aa21.1■□□□□ 0.97
LMNB1-204ENST00000463908 DGAT1O75907 488 aa21.09■□□□□ 0.97
LMNB1-204ENST00000463908 CXCL10P02778 98 aa21.09■□□□□ 0.97
LMNB1-204ENST00000463908 RPLP2P05387 115 aaKnown RBP21.09■□□□□ 0.97
LMNB1-204ENST00000463908 NCLP19338 710 aaKnown RBP21.09■□□□□ 0.97
LMNB1-204ENST00000463908 RFC2P35250 354 aa21.09■□□□□ 0.97
LMNB1-204ENST00000463908 PPIGQ13427 754 aaKnown RBP eCLIP21.09■□□□□ 0.971e-7■□□□□ 8.8
LMNB1-204ENST00000463908 EMC2Q15006 297 aa21.09■□□□□ 0.97
LMNB1-204ENST00000463908 TCTN1Q2MV58 587 aa21.09■□□□□ 0.97
LMNB1-204ENST00000463908 PADI6Q6TGC4 694 aa21.09■□□□□ 0.97
LMNB1-204ENST00000463908 EXOC8Q8IYI6 725 aa21.09■□□□□ 0.97
LMNB1-204ENST00000463908 KCTD17Q8N5Z5 321 aa21.09■□□□□ 0.97
LMNB1-204ENST00000463908 PPP1R16BQ96T49 567 aa21.09■□□□□ 0.97
LMNB1-204ENST00000463908 NT5C3AQ9H0P0 336 aa21.09■□□□□ 0.97
LMNB1-204ENST00000463908 ADAMTS10Q9H324 1103 aa21.09■□□□□ 0.97
LMNB1-204ENST00000463908 BLOC1S4Q9NUP1 217 aa21.09■□□□□ 0.97
LMNB1-204ENST00000463908 SUCLA2Q9P2R7 463 aaPredicted RBP21.09■□□□□ 0.97
LMNB1-204ENST00000463908 KDM3AQ9Y4C1 1321 aa21.08■□□□□ 0.97
LMNB1-204ENST00000463908 ARHGEF35A5YM69 484 aa21.08■□□□□ 0.97
LMNB1-204ENST00000463908 PARNO95453 639 aaKnown RBP21.08■□□□□ 0.97
LMNB1-204ENST00000463908 ME1P48163 572 aa21.08■□□□□ 0.97
LMNB1-204ENST00000463908 NLRP11P59045 1033 aaKnown RBP21.08■□□□□ 0.97
LMNB1-204ENST00000463908 KIZQ2M2Z5 673 aa21.08■□□□□ 0.97
LMNB1-204ENST00000463908 TMEM240Q5SV17 173 aa21.08■□□□□ 0.97
LMNB1-204ENST00000463908 KSR1Q8IVT5 923 aa21.08■□□□□ 0.97
LMNB1-204ENST00000463908 RPUSD2Q8IZ73 545 aaKnown RBP21.08■□□□□ 0.97
LMNB1-204ENST00000463908 CALML4Q96GE6 196 aa21.08■□□□□ 0.97
LMNB1-204ENST00000463908 ZNF668Q96K58 619 aaPredicted RBP21.08■□□□□ 0.97
LMNB1-204ENST00000463908 SPATA32Q96LK8 384 aa21.08■□□□□ 0.97
LMNB1-204ENST00000463908 JPH2Q9BR39 696 aaPredicted RBP21.08■□□□□ 0.97
LMNB1-204ENST00000463908 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.08■□□□□ 0.97
LMNB1-204ENST00000463908 PANK2Q9BZ23 570 aa21.08■□□□□ 0.97
LMNB1-204ENST00000463908 UBE2OQ9C0C9 1292 aaKnown RBP21.08■□□□□ 0.97
LMNB1-204ENST00000463908 CHMP5Q9NZZ3 219 aa21.08■□□□□ 0.97
LMNB1-204ENST00000463908 AKT3Q9Y243 479 aa21.08■□□□□ 0.97
LMNB1-204ENST00000463908 TRPV2Q9Y5S1 764 aa21.08■□□□□ 0.97
LMNB1-204ENST00000463908 EVPLQ92817 2033 aa21.07■□□□□ 0.96
LMNB1-204ENST00000463908 A0A087X0B3 334 aa21.07■□□□□ 0.96
LMNB1-204ENST00000463908 USO1O60763 962 aaKnown RBP21.07■□□□□ 0.96
LMNB1-204ENST00000463908 CYP11B2P19099 503 aa21.07■□□□□ 0.96
LMNB1-204ENST00000463908 PLCG1P19174 1290 aa21.07■□□□□ 0.96
LMNB1-204ENST00000463908 ARL2P36404 184 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms