RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 PIGOQ8TEQ8 1089 aa22.07■■□□□ 1.12
COL9A3-204ENST00000463487 TCP11Q8WWU5 503 aa22.07■■□□□ 1.12
COL9A3-204ENST00000463487 MTIF3Q9H2K0 278 aaKnown RBP22.07■■□□□ 1.12
COL9A3-204ENST00000463487 IL23AQ9NPF7 189 aa22.07■■□□□ 1.12
COL9A3-204ENST00000463487 DDX19AQ9NUU7 478 aaKnown RBP22.07■■□□□ 1.12
COL9A3-204ENST00000463487 FBXO2Q9UK22 296 aaPredicted RBP22.07■■□□□ 1.12
COL9A3-204ENST00000463487 ZDHHC9Q9Y397 364 aa22.07■■□□□ 1.12
COL9A3-204ENST00000463487 PP2D1A8MPX8 630 aa22.06■■□□□ 1.12
COL9A3-204ENST00000463487 ACTN1P12814 892 aa22.06■■□□□ 1.12
COL9A3-204ENST00000463487 CDC25AP30304 524 aa22.06■■□□□ 1.12
COL9A3-204ENST00000463487 CHRDL2Q6WN34 429 aa22.06■■□□□ 1.12
COL9A3-204ENST00000463487 KIAA0319LQ8IZA0 1049 aa22.06■■□□□ 1.12
COL9A3-204ENST00000463487 ZBTB10Q96DT7 871 aa22.06■■□□□ 1.12
COL9A3-204ENST00000463487 MTRQ99707 1265 aa22.06■■□□□ 1.12
COL9A3-204ENST00000463487 SH2D3AQ9BRG2 576 aa22.06■■□□□ 1.12
COL9A3-204ENST00000463487 CSRNP2Q9H175 543 aa22.06■■□□□ 1.12
COL9A3-204ENST00000463487 ATP6V0A4Q9HBG4 840 aa22.06■■□□□ 1.12
COL9A3-204ENST00000463487 CCDC39Q9UFE4 941 aa22.06■■□□□ 1.12
COL9A3-204ENST00000463487 TRPV2Q9Y5S1 764 aa22.06■■□□□ 1.12
COL9A3-204ENST00000463487 DDIT3P35638 169 aa22.05■■□□□ 1.12
COL9A3-204ENST00000463487 CLCN3P51790 818 aa22.05■■□□□ 1.12
COL9A3-204ENST00000463487 EMC2Q15006 297 aa22.05■■□□□ 1.12
COL9A3-204ENST00000463487 HYIQ5T013 277 aa22.05■■□□□ 1.12
COL9A3-204ENST00000463487 DEFB128Q7Z7B8 93 aa22.05■■□□□ 1.12
COL9A3-204ENST00000463487 LRRC71Q8N4P6 559 aa22.05■■□□□ 1.12
COL9A3-204ENST00000463487 USP38Q8NB14 1042 aa22.05■■□□□ 1.12
COL9A3-204ENST00000463487 SCLT1Q96NL6 688 aa22.05■■□□□ 1.12
COL9A3-204ENST00000463487 DHX33Q9H6R0 707 aaKnown RBP22.05■■□□□ 1.12
COL9A3-204ENST00000463487 CDY2AQ9Y6F7 541 aa22.05■■□□□ 1.12
COL9A3-204ENST00000463487 LOXHD1Q8IVV2 1947 aa22.05■■□□□ 1.12
COL9A3-204ENST00000463487 CEP290O15078 2479 aa22.05■■□□□ 1.12
COL9A3-204ENST00000463487 IGKV6-21A0A0C4DH24 114 aa22.04■■□□□ 1.12
COL9A3-204ENST00000463487 ME1P48163 572 aa22.04■■□□□ 1.12
COL9A3-204ENST00000463487 ODR4Q5SWX8 454 aa22.04■■□□□ 1.12
COL9A3-204ENST00000463487 MCPH1Q8NEM0 835 aa22.04■■□□□ 1.12
COL9A3-204ENST00000463487 PSPC1Q8WXF1 523 aaKnown RBP22.04■■□□□ 1.12
COL9A3-204ENST00000463487 CEP89Q96ST8 783 aa22.04■■□□□ 1.12
COL9A3-204ENST00000463487 MMTAG2Q9BU76 263 aaKnown RBP22.04■■□□□ 1.12
COL9A3-204ENST00000463487 CELF4Q9BZC1 486 aaKnown RBP22.04■■□□□ 1.12
COL9A3-204ENST00000463487 CCSER1Q9C0I3 900 aa22.04■■□□□ 1.12
COL9A3-204ENST00000463487 SCAND2PQ9GZW5 306 aaPredicted RBP22.04■■□□□ 1.12
COL9A3-204ENST00000463487 RBM19Q9Y4C8 960 aaKnown RBP22.04■■□□□ 1.12
COL9A3-204ENST00000463487 SQORQ9Y6N5 450 aa22.04■■□□□ 1.12
COL9A3-204ENST00000463487 A0A1W2PPC1 479 aa22.03■■□□□ 1.12
COL9A3-204ENST00000463487 CUTAO60888 179 aa22.03■■□□□ 1.12
COL9A3-204ENST00000463487 EYA4O95677 639 aa22.03■■□□□ 1.12
COL9A3-204ENST00000463487 FAM43BQ6ZT52 329 aaPredicted RBP22.03■■□□□ 1.12
COL9A3-204ENST00000463487 LINC01465Q8N7H1 131 aa22.03■■□□□ 1.12
COL9A3-204ENST00000463487 ZNF579Q8NAF0 562 aaKnown RBP22.03■■□□□ 1.12
COL9A3-204ENST00000463487 SPATA32Q96LK8 384 aa22.03■■□□□ 1.12
COL9A3-204ENST00000463487 BHMT2Q9H2M3 363 aa22.03■■□□□ 1.12
COL9A3-204ENST00000463487 SUCLA2Q9P2R7 463 aaPredicted RBP22.03■■□□□ 1.12
COL9A3-204ENST00000463487 GINS2Q9Y248 185 aa22.03■■□□□ 1.12
COL9A3-204ENST00000463487 ARID2Q68CP9 1835 aa22.03■■□□□ 1.12
COL9A3-204ENST00000463487 EVPLQ92817 2033 aa22.02■■□□□ 1.12
COL9A3-204ENST00000463487 ZBTB39O15060 712 aa22.02■■□□□ 1.12
COL9A3-204ENST00000463487 ASAP2O43150 1006 aa22.02■■□□□ 1.12
COL9A3-204ENST00000463487 USO1O60763 962 aaKnown RBP22.02■■□□□ 1.12
COL9A3-204ENST00000463487 FGBP02675 491 aa22.02■■□□□ 1.12
COL9A3-204ENST00000463487 CHRNA1P02708 482 aa22.02■■□□□ 1.12
COL9A3-204ENST00000463487 CXCL10P02778 98 aa22.02■■□□□ 1.12
COL9A3-204ENST00000463487 VTNP04004 478 aa22.02■■□□□ 1.12
COL9A3-204ENST00000463487 GRIN1Q05586 938 aa22.02■■□□□ 1.12
COL9A3-204ENST00000463487 MGAT3Q09327 533 aa22.02■■□□□ 1.12
COL9A3-204ENST00000463487 TMEM62Q0P6H9 643 aa22.02■■□□□ 1.12
COL9A3-204ENST00000463487 MXD4Q14582 209 aaPredicted RBP22.02■■□□□ 1.12
COL9A3-204ENST00000463487 SEPT8Q92599 483 aa22.02■■□□□ 1.12
COL9A3-204ENST00000463487 CLIC6Q96NY7 704 aa22.02■■□□□ 1.12
COL9A3-204ENST00000463487 EFCAB14O75071 495 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 CRYBB1P53674 252 aaPredicted RBP22.01■■□□□ 1.11
COL9A3-204ENST00000463487 ECM1Q16610 540 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 CNKSR3Q6P9H4 555 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 TRAF7Q6Q0C0 670 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 PADI6Q6TGC4 694 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 TSHZ1Q6ZSZ6 1077 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 ZNF410Q86VK4 478 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 TDHQ8IZJ6 230 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 NLRP7Q8WX94 980 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 SYMPKQ92797 1274 aaKnown RBP22.01■■□□□ 1.11
COL9A3-204ENST00000463487 APBB2Q92870 758 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 TSHZ2Q9NRE2 1034 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 BMP2KQ9NSY1 1161 aaPredicted RBP22.01■■□□□ 1.11
COL9A3-204ENST00000463487 CHMP5Q9NZZ3 219 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 RCOR1Q9UKL0 485 aa22.01■■□□□ 1.11
COL9A3-204ENST00000463487 NBNO60934 754 aa22■■□□□ 1.11
COL9A3-204ENST00000463487 BAIAP3O94812 1187 aa22■■□□□ 1.11
COL9A3-204ENST00000463487 ACRP10323 421 aa22■■□□□ 1.11
COL9A3-204ENST00000463487 GHRP10912 638 aa22■■□□□ 1.11
COL9A3-204ENST00000463487 NLRP11P59045 1033 aaKnown RBP22■■□□□ 1.11
COL9A3-204ENST00000463487 GRB10Q13322 594 aa22■■□□□ 1.11
COL9A3-204ENST00000463487 TFDP1Q14186 410 aa22■■□□□ 1.11
COL9A3-204ENST00000463487 KIZQ2M2Z5 673 aa22■■□□□ 1.11
COL9A3-204ENST00000463487 TMEM119Q4V9L6 283 aa22■■□□□ 1.11
COL9A3-204ENST00000463487 SPECC1Q5M775 1068 aa22■■□□□ 1.11
COL9A3-204ENST00000463487 CCDC73Q6ZRK6 1079 aa22■■□□□ 1.11
COL9A3-204ENST00000463487 ZNF365Q70YC5 407 aa22■■□□□ 1.11
COL9A3-204ENST00000463487 RHPN2Q8IUC4 686 aa22■■□□□ 1.11
COL9A3-204ENST00000463487 RNPC3Q96LT9 517 aaKnown RBP22■■□□□ 1.11
COL9A3-204ENST00000463487 IFIH1Q9BYX4 1025 aaKnown RBP22■■□□□ 1.11
COL9A3-204ENST00000463487 INO80BQ9C086 356 aaPredicted RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms