RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 XRCC5P13010 732 aaKnown RBP14.07□□□□□ -0.16
VAPB-203ENST00000463370 RPL13P26373 211 aaKnown RBP14.07□□□□□ -0.16
VAPB-203ENST00000463370 SFNP31947 248 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 TTLL12Q14166 644 aaPredicted RBP14.07□□□□□ -0.16
VAPB-203ENST00000463370 XKR9Q5GH70 373 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 ZNF746Q6NUN9 644 aaPredicted RBP14.07□□□□□ -0.16
VAPB-203ENST00000463370 CCDC170Q8IYT3 715 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 CCDC42Q96M95 316 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 EIF3CQ99613 913 aaKnown RBP14.07□□□□□ -0.16
VAPB-203ENST00000463370 PAGR1Q9BTK6 254 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 GBP3Q9H0R5 595 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 CEP72Q9P209 647 aa14.07□□□□□ -0.16
VAPB-203ENST00000463370 CNMDO75829 334 aa14.06□□□□□ -0.16
VAPB-203ENST00000463370 STBD1O95210 358 aa14.06□□□□□ -0.16
VAPB-203ENST00000463370 PLS3P13797 630 aa14.06□□□□□ -0.16
VAPB-203ENST00000463370 CYLC1P35663 651 aaPredicted RBP14.06□□□□□ -0.16
VAPB-203ENST00000463370 PPATQ06203 517 aa14.06□□□□□ -0.16
VAPB-203ENST00000463370 ERCC6LQ2NKX8 1250 aa14.06□□□□□ -0.16
VAPB-203ENST00000463370 SWSAP1Q6NVH7 229 aa14.06□□□□□ -0.16
VAPB-203ENST00000463370 CCDC60Q8IWA6 550 aaPredicted RBP14.06□□□□□ -0.16
VAPB-203ENST00000463370 ZSWIM2Q8NEG5 633 aa14.06□□□□□ -0.16
VAPB-203ENST00000463370 L3MBTL3Q96JM7 780 aaPredicted RBP14.06□□□□□ -0.16
VAPB-203ENST00000463370 KIFC3Q9BVG8 833 aa14.06□□□□□ -0.16
VAPB-203ENST00000463370 SPATC1LQ9H0A9 340 aa14.06□□□□□ -0.16
VAPB-203ENST00000463370 JPH1Q9HDC5 661 aaPredicted RBP14.06□□□□□ -0.16
VAPB-203ENST00000463370 DMAC2Q9NW81 257 aa14.06□□□□□ -0.16
VAPB-203ENST00000463370 SPATA31C2B4DYI2 1134 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 MAFGO15525 162 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 KIF11P52732 1056 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 MOGSQ13724 837 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 ERO1BQ86YB8 467 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 RIOX2Q8IUF8 465 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 FAM186BQ8IYM0 893 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 ANKRD13AQ8IZ07 590 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 CHST13Q8NET6 341 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 CCDC43Q96MW1 224 aaKnown RBP14.05□□□□□ -0.16
VAPB-203ENST00000463370 SENP7Q9BQF6 1050 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 ASCC2Q9H1I8 757 aaPredicted RBP14.05□□□□□ -0.16
VAPB-203ENST00000463370 TXNRD2Q9NNW7 524 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 LARSQ9P2J5 1176 aaKnown RBP14.05□□□□□ -0.16
VAPB-203ENST00000463370 AJAP1Q9UKB5 411 aaPredicted RBP14.05□□□□□ -0.16
VAPB-203ENST00000463370 UBE4BO95155 1302 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 SPDYE5A6NIY4 337 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 PON1P27169 355 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 PEX3P56589 373 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 ACTR2P61160 394 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 KRT83P78385 493 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 NFIL3Q16649 462 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 ASTE1Q2TB18 679 aaPredicted RBP14.05□□□□□ -0.16
VAPB-203ENST00000463370 EAPPQ56P03 285 aaPredicted RBP14.05□□□□□ -0.16
VAPB-203ENST00000463370 CCDC122Q5T0U0 273 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 FAM102BQ5T8I3 360 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 DPY19L2Q6NUT2 758 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 USP50Q70EL3 339 aaPredicted RBP14.05□□□□□ -0.16
VAPB-203ENST00000463370 NCAPG2Q86XI2 1143 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 SLC9A2Q9UBY0 812 aa14.05□□□□□ -0.16
VAPB-203ENST00000463370 SOWAHBA6NEL2 793 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 SLC16A4O15374 487 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 PSMC2P35998 433 aaKnown RBP14.04□□□□□ -0.16
VAPB-203ENST00000463370 ARID5AQ03989 594 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 GFPT1Q06210 699 aaPredicted RBP14.04□□□□□ -0.16
VAPB-203ENST00000463370 GJB7Q6PEY0 223 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 SEPT14Q6ZU15 432 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 CYFIP1Q7L576 1253 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 HS2ST1Q7LGA3 356 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 KIAA1328Q86T90 577 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 SYCP3Q8IZU3 236 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 RDH13Q8NBN7 331 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 BSNDQ8WZ55 320 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 JAKMIP2Q96AA8 810 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 EDEM3Q9BZQ6 932 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 PCIF1Q9H4Z3 704 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 METTL14Q9HCE5 456 aaKnown RBP14.04□□□□□ -0.16
VAPB-203ENST00000463370 POTEJP0CG39 1038 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 TRIM49P0CI25 452 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 TRIM49CP0CI26 452 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 ALDH5A1P51649 535 aaPredicted RBP14.04□□□□□ -0.16
VAPB-203ENST00000463370 IRX3P78415 501 aaPredicted RBP14.04□□□□□ -0.16
VAPB-203ENST00000463370 EXOC3L4Q17RC7 722 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 ABHD15Q6UXT9 468 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 PROCA1Q8NCQ7 364 aaPredicted RBP14.04□□□□□ -0.16
VAPB-203ENST00000463370 OPTNQ96CV9 577 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 CBWD1Q9BRT8 395 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 HAUS4Q9H6D7 363 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 SIX2Q9NPC8 291 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 ANKEF1Q9NU02 776 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 FHOD1Q9Y613 1164 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 LCTP09848 1927 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 NFASCO94856 1347 aa14.04□□□□□ -0.16
VAPB-203ENST00000463370 PTPRFP10586 1907 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 TADA3O75528 432 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 UCHL3P15374 230 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 GJA5P36382 358 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 RAPGEF1Q13905 1077 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 STXBP2Q15833 593 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 ENOX2Q16206 610 aaKnown RBP14.03□□□□□ -0.16
VAPB-203ENST00000463370 Q3C1V9 767 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 GNPTABQ3T906 1256 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 CBWD6Q4V339 395 aa14.03□□□□□ -0.16
VAPB-203ENST00000463370 CBWD3Q5JTY5 395 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms