RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 KIZQ2M2Z5 673 aa22.44■■□□□ 1.18
VARS-221ENST00000463184 SMAP1Q8IYB5 467 aaPredicted RBP22.44■■□□□ 1.18
VARS-221ENST00000463184 RASEFQ8IZ41 740 aa22.44■■□□□ 1.18
VARS-221ENST00000463184 OSMRQ99650 979 aa22.44■■□□□ 1.18
VARS-221ENST00000463184 ZMYND12Q9H0C1 365 aa22.44■■□□□ 1.18
VARS-221ENST00000463184 ATP6V0A4Q9HBG4 840 aa22.44■■□□□ 1.18
VARS-221ENST00000463184 TYW1Q9NV66 732 aaKnown RBP22.44■■□□□ 1.18
VARS-221ENST00000463184 TMEM161AQ9NX61 479 aa22.44■■□□□ 1.18
VARS-221ENST00000463184 CEP131Q9UPN4 1083 aa22.44■■□□□ 1.18
VARS-221ENST00000463184 PCDHGC5Q9Y5F6 944 aa22.44■■□□□ 1.18
VARS-221ENST00000463184 FNDC1Q4ZHG4 1894 aaPredicted RBP22.43■■□□□ 1.18
VARS-221ENST00000463184 ESYT2A0FGR8 921 aa22.43■■□□□ 1.18
VARS-221ENST00000463184 GPR32O75388 356 aa22.43■■□□□ 1.18
VARS-221ENST00000463184 CBX2Q14781 532 aaPredicted RBP22.43■■□□□ 1.18
VARS-221ENST00000463184 BMP8AQ7Z5Y6 402 aa22.43■■□□□ 1.18
VARS-221ENST00000463184 FAM228AQ86W67 206 aa22.43■■□□□ 1.18
VARS-221ENST00000463184 THNSL1Q8IYQ7 743 aa22.43■■□□□ 1.18
VARS-221ENST00000463184 METTL13Q8N6R0 699 aa22.43■■□□□ 1.18
VARS-221ENST00000463184 COLGALT1Q8NBJ5 622 aa22.43■■□□□ 1.18
VARS-221ENST00000463184 CCDC12Q8WUD4 166 aaPredicted RBP22.43■■□□□ 1.18
VARS-221ENST00000463184 C6orf50Q9HD87 102 aa22.43■■□□□ 1.18
VARS-221ENST00000463184 TCEAL9Q9UHQ7 104 aa22.43■■□□□ 1.18
VARS-221ENST00000463184 USP15Q9Y4E8 981 aaPredicted RBP22.43■■□□□ 1.18
VARS-221ENST00000463184 PCDHA10Q9Y5I2 948 aa22.43■■□□□ 1.18
VARS-221ENST00000463184 TRIOO75962 3097 aa22.43■■□□□ 1.18
VARS-221ENST00000463184 EVPLQ92817 2033 aa22.43■■□□□ 1.18
VARS-221ENST00000463184 PER2O15055 1255 aa22.42■■□□□ 1.18
VARS-221ENST00000463184 MAGEB2O15479 319 aa22.42■■□□□ 1.18
VARS-221ENST00000463184 PSAPP07602 524 aa22.42■■□□□ 1.18
VARS-221ENST00000463184 LAG3P18627 525 aa22.42■■□□□ 1.18
VARS-221ENST00000463184 ADD1P35611 737 aaKnown RBP22.42■■□□□ 1.18
VARS-221ENST00000463184 MRE11P49959 708 aa22.42■■□□□ 1.18
VARS-221ENST00000463184 METAP2P50579 478 aaKnown RBP eCLIP22.42■■□□□ 1.181e-7■■□□□ 12.5
VARS-221ENST00000463184 DUSP6Q16828 381 aa22.42■■□□□ 1.18
VARS-221ENST00000463184 ZNF710Q8N1W2 664 aa22.42■■□□□ 1.18
VARS-221ENST00000463184 PPP1R16BQ96T49 567 aa22.42■■□□□ 1.18
VARS-221ENST00000463184 PHF7Q9BWX1 381 aaPredicted RBP22.42■■□□□ 1.18
VARS-221ENST00000463184 CWH43Q9H720 699 aa22.42■■□□□ 1.18
VARS-221ENST00000463184 NAP1L2Q9ULW6 460 aaPredicted RBP22.42■■□□□ 1.18
VARS-221ENST00000463184 LZTS1Q9Y250 596 aa22.42■■□□□ 1.18
VARS-221ENST00000463184 PLXNA4Q9HCM2 1894 aa22.42■■□□□ 1.18
VARS-221ENST00000463184 WDFY4Q6ZS81 3184 aa22.41■■□□□ 1.18
VARS-221ENST00000463184 FSCN2O14926 492 aa22.41■■□□□ 1.18
VARS-221ENST00000463184 HOXA2O43364 376 aa22.41■■□□□ 1.18
VARS-221ENST00000463184 VTNP04004 478 aa22.41■■□□□ 1.18
VARS-221ENST00000463184 ATF7P17544 494 aaPredicted RBP22.41■■□□□ 1.18
VARS-221ENST00000463184 ERVFC1P60507 584 aa22.41■■□□□ 1.18
VARS-221ENST00000463184 FGD1P98174 961 aa22.41■■□□□ 1.18
VARS-221ENST00000463184 DSC3Q14574 896 aa22.41■■□□□ 1.18
VARS-221ENST00000463184 TRIM67Q6ZTA4 783 aa22.41■■□□□ 1.18
VARS-221ENST00000463184 REXO1Q8N1G1 1221 aaKnown RBP22.41■■□□□ 1.18
VARS-221ENST00000463184 FGFR1P11362 822 aa22.4■■□□□ 1.18
VARS-221ENST00000463184 GNA11P29992 359 aa22.4■■□□□ 1.18
VARS-221ENST00000463184 PLCB3Q01970 1234 aa22.4■■□□□ 1.18
VARS-221ENST00000463184 PKN1Q16512 942 aa22.4■■□□□ 1.18
VARS-221ENST00000463184 TRMT1LQ7Z2T5 733 aaKnown RBP22.4■■□□□ 1.18
VARS-221ENST00000463184 SUSD6Q92537 303 aa22.4■■□□□ 1.18
VARS-221ENST00000463184 FAM167AQ96KS9 214 aa22.4■■□□□ 1.18
VARS-221ENST00000463184 TMEM117Q9H0C3 514 aa22.4■■□□□ 1.18
VARS-221ENST00000463184 GABBR1Q9UBS5 961 aa22.4■■□□□ 1.18
VARS-221ENST00000463184 PUF60Q9UHX1 559 aaKnown RBP22.4■■□□□ 1.18
VARS-221ENST00000463184 TECTAO75443 2155 aa22.4■■□□□ 1.18
VARS-221ENST00000463184 ZNF318Q5VUA4 2279 aa22.4■■□□□ 1.18
VARS-221ENST00000463184 TMEM221A6NGB7 291 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 M0R296 226 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 SRGAP2BP0DMP2 458 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 ZSCAN20P17040 1043 aaPredicted RBP22.39■■□□□ 1.17
VARS-221ENST00000463184 TMOD1P28289 359 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 CIITAP33076 1130 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 ZXDAP98168 799 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 PRR16Q569H4 304 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 TMEM184AQ6ZMB5 413 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 VN1R2Q8NFZ6 395 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 MRPS27Q92552 414 aaKnown RBP22.39■■□□□ 1.17
VARS-221ENST00000463184 PBXIP1Q96AQ6 731 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 MAP7D2Q96T17 732 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 HCSTQ9UBK5 93 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 SAMM50Q9Y512 469 aa22.39■■□□□ 1.17
VARS-221ENST00000463184 MYH9P35579 1960 aaKnown RBP22.39■■□□□ 1.17
VARS-221ENST00000463184 PRPF3O43395 683 aaKnown RBP22.38■■□□□ 1.17
VARS-221ENST00000463184 NLRP11P59045 1033 aaKnown RBP22.38■■□□□ 1.17
VARS-221ENST00000463184 EFCAB12Q6NXP0 572 aa22.38■■□□□ 1.17
VARS-221ENST00000463184 BICD2Q8TD16 824 aa22.38■■□□□ 1.17
VARS-221ENST00000463184 RASGRP4Q8TDF6 673 aa22.38■■□□□ 1.17
VARS-221ENST00000463184 RPGRIP1Q96KN7 1286 aa22.38■■□□□ 1.17
VARS-221ENST00000463184 CASD1Q96PB1 797 aa22.38■■□□□ 1.17
VARS-221ENST00000463184 NGRNQ9NPE2 291 aaKnown RBP22.38■■□□□ 1.17
VARS-221ENST00000463184 NRBP2Q9NSY0 501 aa22.38■■□□□ 1.17
VARS-221ENST00000463184 AKT3Q9Y243 479 aa22.38■■□□□ 1.17
VARS-221ENST00000463184 ADAMTS3O15072 1205 aa22.37■■□□□ 1.17
VARS-221ENST00000463184 EIF4BP23588 611 aaKnown RBP22.37■■□□□ 1.17
VARS-221ENST00000463184 CLCN3P51790 818 aa22.37■■□□□ 1.17
VARS-221ENST00000463184 RBM10P98175 930 aaKnown RBP22.37■■□□□ 1.17
VARS-221ENST00000463184 APOBRQ0VD83 1088 aa22.37■■□□□ 1.17
VARS-221ENST00000463184 KCNC3Q14003 757 aa22.37■■□□□ 1.17
VARS-221ENST00000463184 Q6ZUG5 572 aa22.37■■□□□ 1.17
VARS-221ENST00000463184 LINC01465Q8N7H1 131 aa22.37■■□□□ 1.17
VARS-221ENST00000463184 ADAMTS10Q9H324 1103 aa22.37■■□□□ 1.17
VARS-221ENST00000463184 WDR64B1ANS9 1081 aa22.36■■□□□ 1.17
VARS-221ENST00000463184 PPM1AP35813 382 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms