RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 DYMQ7RTS9 669 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 LINC01465Q8N7H1 131 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 ARRDC4Q8NCT1 418 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 TIPINQ9BVW5 301 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 BMP2KQ9NSY1 1161 aaPredicted RBP15.94■□□□□ 0.14
COL6A1-202ENST00000463060 ODF2LQ9ULJ1 636 aa15.94■□□□□ 0.14
COL6A1-202ENST00000463060 RRN3P2A6NIE6 340 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 RSPH10B2B2RC85 870 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 USO1O60763 962 aaKnown RBP15.93■□□□□ 0.14
COL6A1-202ENST00000463060 RHOBTB3O94955 611 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 GJB1P08034 283 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 RSPH10BP0C881 870 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 SMIM10L2AP0DMW4 78 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 SMIM10L2BP0DMW5 78 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 RFC5P40937 340 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 ZNF445P59923 1031 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 ASIC1P78348 528 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 MKRN4PQ13434 485 aaPredicted RBP15.93■□□□□ 0.14
COL6A1-202ENST00000463060 KMT5BQ4FZB7 885 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 TRAPPC12Q8WVT3 735 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 SMARCE1Q969G3 411 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 DEFB118Q96PH6 123 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 KATNAL1Q9BW62 490 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 POLD4Q9HCU8 107 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 MAN1B1Q9UKM7 699 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 TRPC6Q9Y210 931 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 PCDHA2Q9Y5H9 948 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 NRCAMQ92823 1304 aa15.93■□□□□ 0.14
COL6A1-202ENST00000463060 SYCE3A1L190 88 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 MBLAC1A4D2B0 266 aaPredicted RBP15.92■□□□□ 0.14
COL6A1-202ENST00000463060 MOXD2PA6NHM9 499 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 CABYRO75952 493 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 C22orf31O95567 290 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 KLRC1P26715 233 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 MNX1P50219 401 aaPredicted RBP15.92■□□□□ 0.14
COL6A1-202ENST00000463060 CACNB1Q02641 598 aaPredicted RBP15.92■□□□□ 0.14
COL6A1-202ENST00000463060 RAD51AP2Q09MP3 1159 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 PPFIA1Q13136 1202 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 GRIK4Q16099 956 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 NBPF20Q3BBV1 942 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 SESTD1Q86VW0 696 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 EXOC8Q8IYI6 725 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 TRIML1Q8N9V2 468 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 MCPH1Q8NEM0 835 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 FIZ1Q96SL8 496 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 GZF1Q9H116 711 aaPredicted RBP15.92■□□□□ 0.14
COL6A1-202ENST00000463060 PANK4Q9NVE7 773 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 PHF24Q9UPV7 400 aa15.92■□□□□ 0.14
COL6A1-202ENST00000463060 MAGEB2O15479 319 aa15.91■□□□□ 0.14
COL6A1-202ENST00000463060 GAS2O43903 313 aaKnown RBP15.91■□□□□ 0.14
COL6A1-202ENST00000463060 HIP1RO75146 1068 aa15.91■□□□□ 0.14
COL6A1-202ENST00000463060 SGPL1O95470 568 aa15.91■□□□□ 0.14
COL6A1-202ENST00000463060 ARL2P36404 184 aa15.91■□□□□ 0.14
COL6A1-202ENST00000463060 EMC2Q15006 297 aa15.91■□□□□ 0.14
COL6A1-202ENST00000463060 CCDC65Q8IXS2 484 aa15.91■□□□□ 0.14
COL6A1-202ENST00000463060 SLC43A3Q8NBI5 491 aa15.91■□□□□ 0.14
COL6A1-202ENST00000463060 CCDC43Q96MW1 224 aaKnown RBP15.91■□□□□ 0.14
COL6A1-202ENST00000463060 ATP6V0A4Q9HBG4 840 aa15.91■□□□□ 0.14
COL6A1-202ENST00000463060 GPRC5CQ9NQ84 441 aa15.91■□□□□ 0.14
COL6A1-202ENST00000463060 SETD4Q9NVD3 440 aa15.91■□□□□ 0.14
COL6A1-202ENST00000463060 HDAC6Q9UBN7 1215 aa15.91■□□□□ 0.14
COL6A1-202ENST00000463060 SFI1A8K8P3 1242 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 DNM1LO00429 736 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 MYCP01106 439 aaPredicted RBP15.9■□□□□ 0.14
COL6A1-202ENST00000463060 GAP43P17677 238 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 POLGP54098 1239 aaPredicted RBP15.9■□□□□ 0.14
COL6A1-202ENST00000463060 SOX10P56693 466 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 RTP1P59025 263 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 TBC1D8BQ0IIM8 1120 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 COASYQ13057 564 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 PSMD2Q13200 908 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 NFRKBQ6P4R8 1299 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 MTHFD1LQ6UB35 978 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 PPP1R13LQ8WUF5 828 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 LMBR1Q8WVP7 490 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 SLC7A3Q8WY07 619 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 KIFAP3Q92845 792 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 ZBTB10Q96DT7 871 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 JPH2Q9BR39 696 aaPredicted RBP15.9■□□□□ 0.14
COL6A1-202ENST00000463060 NTPCRQ9BSD7 190 aaKnown RBP15.9■□□□□ 0.14
COL6A1-202ENST00000463060 MCOLN1Q9GZU1 580 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 OLFML3Q9NRN5 406 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 SEL1LQ9UBV2 794 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 COL4A3BPQ9Y5P4 624 aa15.9■□□□□ 0.14
COL6A1-202ENST00000463060 KAT6AQ92794 2004 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 BIN1O00499 593 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 KRT18P05783 430 aaKnown RBP15.89■□□□□ 0.13
COL6A1-202ENST00000463060 IDEP14735 1019 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 GJA8P48165 433 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 NLRP12P59046 1061 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 TYRO3Q06418 890 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 STK4Q13043 487 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 DRP2Q13474 957 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 COBLL1Q53SF7 1204 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 ZNF658Q5TYW1 1059 aaPredicted RBP15.89■□□□□ 0.13
COL6A1-202ENST00000463060 IER5Q5VY09 327 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 ISM2Q6H9L7 571 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 U2AF1L4Q8WU68 220 aaKnown RBP15.89■□□□□ 0.13
COL6A1-202ENST00000463060 BSNDQ8WZ55 320 aa15.89■□□□□ 0.13
COL6A1-202ENST00000463060 KCNN1Q92952 543 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms