RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 MGEA5O60502 916 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 TBX10O75333 385 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 REC8O95072 547 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 VTNP04004 478 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 SRGAP2BP0DMP2 458 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 ATP4AP20648 1035 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 RPS6KB1P23443 525 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 DNAJB1P25685 340 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 CIITAP33076 1130 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 IRS1P35568 1242 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 PDE12Q6L8Q7 609 aaKnown RBP17.4■□□□□ 0.38
SKA3-204ENST00000462482 TRIM22Q8IYM9 498 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 ABI1Q8IZP0 508 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 TMEM40Q8WWA1 233 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 PHKBQ93100 1093 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 C22orf23Q9BZE7 217 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 ELAC1Q9H777 363 aaKnown RBP17.4■□□□□ 0.38
SKA3-204ENST00000462482 PUF60Q9UHX1 559 aaKnown RBP17.4■□□□□ 0.38
SKA3-204ENST00000462482 SNX14Q9Y5W7 946 aa17.4■□□□□ 0.38
SKA3-204ENST00000462482 ZBTB42B2RXF5 422 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 C9IYK1 514 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 FGF18O76093 207 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 LAG3P18627 525 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 SFNP31947 248 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 HSPA4P34932 840 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 NLRP5P59047 1200 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 PKN1Q16512 942 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 FAM102BQ5T8I3 360 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 EFCAB12Q6NXP0 572 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 FAM228AQ86W67 206 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 KCNB2Q92953 911 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 CDCA3Q99618 268 aaPredicted RBP17.39■□□□□ 0.37
SKA3-204ENST00000462482 TLR9Q9NR96 1032 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 DISC1Q9NRI5 854 aa17.39■□□□□ 0.37
SKA3-204ENST00000462482 GAS7O60861 476 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 OATP04181 439 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 IFNAR1P17181 557 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 USP11P51784 963 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 CLCN3P51790 818 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 JAK3P52333 1124 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 NLRP11P59045 1033 aaKnown RBP17.38■□□□□ 0.37
SKA3-204ENST00000462482 ADGRD2Q7Z7M1 963 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 FBXL16Q8N461 479 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 COLGALT1Q8NBJ5 622 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 MSLNLQ96KJ4 702 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 RIT2Q99578 217 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 TEKT3Q9BXF9 490 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 TMEM117Q9H0C3 514 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 SH3GLB2Q9NR46 395 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 TYW1Q9NV66 732 aaKnown RBP17.38■□□□□ 0.37
SKA3-204ENST00000462482 NID2Q14112 1375 aa17.38■□□□□ 0.37
SKA3-204ENST00000462482 CPLX1O14810 134 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 CHMP2AO43633 222 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 GPR32O75388 356 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 EYA4O95677 639 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 FGFR1P11362 822 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 EIF4BP23588 611 aaKnown RBP17.37■□□□□ 0.37
SKA3-204ENST00000462482 HOXD11P31277 338 aaPredicted RBP17.37■□□□□ 0.37
SKA3-204ENST00000462482 CCT2P78371 535 aaKnown RBP17.37■□□□□ 0.37
SKA3-204ENST00000462482 FAM189BP81408 668 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 KRT17Q04695 432 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 TBC1D8BQ0IIM8 1120 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 COASYQ13057 564 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 LRCH2Q5VUJ6 765 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 CPLX2Q6PUV4 134 aaKnown RBP17.37■□□□□ 0.37
SKA3-204ENST00000462482 RNF135Q8IUD6 432 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 MFSD14AQ96MC6 490 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 VPS54Q9P1Q0 977 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 RALGAPA2Q2PPJ7 1873 aa17.37■□□□□ 0.37
SKA3-204ENST00000462482 BRWD1Q9NSI6 2320 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 PPM1AP35813 382 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 CDC42EP1Q00587 391 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 PRKCEQ02156 737 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 SSRP1Q08945 709 aaKnown RBP17.36■□□□□ 0.37
SKA3-204ENST00000462482 HERC4Q5GLZ8 1057 aaPredicted RBP17.36■□□□□ 0.37
SKA3-204ENST00000462482 LRRC43Q8N309 656 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 LRRC71Q8N4P6 559 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 RNF169Q8NCN4 708 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 SMRP1Q8NCR6 262 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 ZNF558Q96NG5 402 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 KCNH6Q9H252 994 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 ENTPD7Q9NQZ7 604 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 CLEC1BQ9P126 229 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 MUTYHQ9UIF7 546 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 BARX2Q9UMQ3 279 aaPredicted RBP17.36■□□□□ 0.37
SKA3-204ENST00000462482 LZTS1Q9Y250 596 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 KAT6AQ92794 2004 aa17.36■□□□□ 0.37
SKA3-204ENST00000462482 MSH4O15457 936 aa17.35■□□□□ 0.37
SKA3-204ENST00000462482 PDIA3P30101 505 aaKnown RBP17.35■□□□□ 0.37
SKA3-204ENST00000462482 DNM2P50570 870 aa17.35■□□□□ 0.37
SKA3-204ENST00000462482 DSC3Q14574 896 aa17.35■□□□□ 0.37
SKA3-204ENST00000462482 BMS1Q14692 1282 aaKnown RBP17.35■□□□□ 0.37
SKA3-204ENST00000462482 MIER3Q7Z3K6 550 aa17.35■□□□□ 0.37
SKA3-204ENST00000462482 RDM1Q8NG50 284 aa17.35■□□□□ 0.37
SKA3-204ENST00000462482 NLRP7Q8WX94 980 aa17.35■□□□□ 0.37
SKA3-204ENST00000462482 MRPS27Q92552 414 aaKnown RBP17.35■□□□□ 0.37
SKA3-204ENST00000462482 AGXT2Q9BYV1 514 aa17.35■□□□□ 0.37
SKA3-204ENST00000462482 NGRNQ9NPE2 291 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms