RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 CAPN11Q9UMQ6 739 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 CSADQ9Y600 493 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 ATXN2Q99700 1313 aaKnown RBP13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 IRF6O14896 467 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 KIF1CO43896 1103 aaKnown RBP13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 KRT14P02533 472 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 EPB41P11171 864 aaKnown RBP13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 EPHB4P54760 987 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 MRPS9P82933 396 aaKnown RBP13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 COG2Q14746 738 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 NOL9Q5SY16 702 aaKnown RBP13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 RNF187Q5TA31 235 aaPredicted RBP13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 CREG2Q8IUH2 290 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 MMGT1Q8N4V1 131 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 REPS2Q8NFH8 660 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 SMCR8Q8TEV9 937 aaPredicted RBP13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 PSMB7Q99436 277 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 ZNF577Q9BSK1 485 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 ZHX3Q9H4I2 956 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 ZNF408Q9H9D4 720 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 NHEJ1Q9H9Q4 299 aaPredicted RBP13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 MAGEF1Q9HAY2 307 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 AGPAT5Q9NUQ2 364 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 ZNF214Q9UL59 606 aaPredicted RBP13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 PCNTO95613 3336 aa13.13□□□□□ -0.31
TNRC6A-204ENST00000462400 SPDYE16A6NNV3 312 aaPredicted RBP13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 C19orf81C9J6K1 198 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 TBX3O15119 743 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 NNTQ13423 1086 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 ALS2CLQ60I27 953 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 RNF207Q6ZRF8 634 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 TRMT1LQ7Z2T5 733 aaKnown RBP13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 GPBP1Q86WP2 473 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 IRF2BP1Q8IU81 584 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 PIGOQ8TEQ8 1089 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 FAM20AQ96MK3 541 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 ZIM3Q96PE6 472 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 EIF2AK1Q9BQI3 630 aaKnown RBP13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 SMARCAL1Q9NZC9 954 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 SNX12Q9UMY4 172 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 MYH10P35580 1976 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 A6NNZ2 444 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 LGALS16A8MUM7 142 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 GAS7O60861 476 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 GUCY1A3Q02108 690 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 KIF5AQ12840 1032 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 TUBB8Q3ZCM7 444 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 ZNF662Q6ZS27 426 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 OTOP1Q7RTM1 612 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 SPATA4Q8NEY3 305 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 DNAJC19Q96DA6 116 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 FAM212AQ96EL1 285 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 DYDC2Q96IM9 177 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 C12orf42Q96LP6 360 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 UNC45AQ9H3U1 944 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 A1CFQ9NQ94 594 aaKnown RBP13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 ZNHIT6Q9NWK9 470 aaKnown RBP13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
TNRC6A-204ENST00000462400 PTPRFP10586 1907 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 KDM3AQ9Y4C1 1321 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 GLTPD2A6NH11 291 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 TRAF5O00463 557 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 SORBS3O60504 671 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 PSMD10O75832 226 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 MYL1P05976 194 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 ERCC3P19447 782 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 TRIM21P19474 475 aaKnown RBP13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 IBSPP21815 317 aaPredicted RBP13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 LSP1P33241 339 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 NAP1L1P55209 391 aaKnown RBP13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 HYIQ5T013 277 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 NAA35Q5VZE5 725 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 EMBQ6PCB8 327 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 MICALCLQ6ZW33 695 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 RPAINQ86UA6 219 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 SPATS2Q86XZ4 545 aaKnown RBP13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 MCF2L2Q86YR7 1114 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 TPH2Q8IWU9 490 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 TRIM47Q96LD4 638 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 RNPC3Q96LT9 517 aaKnown RBP13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 RMDN3Q96TC7 470 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 MXRA8Q9BRK3 442 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 NT5C3AQ9H0P0 336 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 CENPHQ9H3R5 247 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 R3HDMLQ9H3Y0 253 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 EHMT1Q9H9B1 1298 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 WRAP73Q9P2S5 460 aaPredicted RBP13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 CHUKO15111 745 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 CXCR5P32302 372 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 MEA1Q16626 185 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 ARSHQ5FYA8 562 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 HAUS3Q68CZ6 603 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 ANKRD40Q6AI12 368 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 UNC13DQ70J99 1090 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 SLC5A5Q92911 643 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 TAF1DQ9H5J8 278 aaPredicted RBP13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 KCNH7Q9NS40 1196 aa13.11□□□□□ -0.31
TNRC6A-204ENST00000462400 STIM2Q9P246 746 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms