RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 USP2O75604 605 aaPredicted RBP6.4□□□□□ -1.38
COPS3-204ENST00000462236 NPTXRO95502 500 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 MAP2K2P36507 400 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 INF2Q27J81 1249 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 CST9Q5W186 159 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 PNMA8AQ86V59 439 aaPredicted RBP6.4□□□□□ -1.38
COPS3-204ENST00000462236 CPNE8Q86YQ8 564 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 NIM1KQ8IY84 436 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 ABI1Q8IZP0 508 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 SLC7A14Q8TBB6 771 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 MYLIPQ8WY64 445 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 ZNF622Q969S3 477 aaKnown RBP eCLIP6.4□□□□□ -1.38
COPS3-204ENST00000462236 MFSD3Q96ES6 412 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 CAPNS2Q96L46 248 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 ALG1Q9BT22 464 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 TRIM39Q9HCM9 518 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 PDLIM7Q9NR12 457 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 NDOR1Q9UHB4 597 aa6.4□□□□□ -1.38
COPS3-204ENST00000462236 ANKRD36CQ5JPF3 1778 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 PSME4Q14997 1843 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 A0A1W2PQ27 194 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 A0A1W2PQ64 194 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 A0A1W2PQC6 194 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 A0A1W2PQD8 194 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 BIN1O00499 593 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 WNT9AO14904 365 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 RNMTO43148 476 aaKnown RBP6.39□□□□□ -1.39
COPS3-204ENST00000462236 ASLP04424 464 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 PNLIPP16233 465 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 SLC39A6Q13433 755 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 CBX2Q14781 532 aaPredicted RBP6.39□□□□□ -1.39
COPS3-204ENST00000462236 TM4SF20Q53R12 229 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 C1orf141Q5JVX7 400 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 RNF187Q5TA31 235 aaPredicted RBP6.39□□□□□ -1.39
COPS3-204ENST00000462236 MBLAC2Q68D91 279 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 KCNT2Q6UVM3 1135 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 NLRX1Q86UT6 975 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 RIOX2Q8IUF8 465 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 PANK1Q8TE04 598 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 MASTLQ96GX5 879 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 CLUHP3Q96NS8 147 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 GPR101Q96P66 508 aaPredicted RBP6.39□□□□□ -1.39
COPS3-204ENST00000462236 X6R8D5 127 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 RNF123Q5XPI4 1314 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 HTTP42858 3142 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 LAMB4A4D0S4 1761 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 LAMB1P07942 1786 aa6.39□□□□□ -1.39
COPS3-204ENST00000462236 ARVCFO00192 962 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 GSTA4O15217 222 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 CA12O43570 354 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 CAMTA2O94983 1202 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 NCLP19338 710 aaKnown RBP6.38□□□□□ -1.39
COPS3-204ENST00000462236 FLT3P36888 993 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 ARL4AP40617 200 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 ECE1P42892 770 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 GUCY1A3Q02108 690 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 PAK1Q13153 545 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 CCDC93Q567U6 631 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 CYP4F22Q6NT55 531 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 BRAPQ7Z569 592 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 MTDHQ86UE4 582 aaKnown RBP6.38□□□□□ -1.39
COPS3-204ENST00000462236 GPC2Q8N158 579 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 LZTR1Q8N653 840 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 MTA3Q9BTC8 594 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 PCDHA2Q9Y5H9 948 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 DLG5Q8TDM6 1919 aa6.38□□□□□ -1.39
COPS3-204ENST00000462236 SCN9AQ15858 1988 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 TCRBV16S1A1N1A0A5B0 115 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 CRTAMO95727 393 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 LCP1P13796 627 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 POU3F2P20265 443 aaPredicted RBP6.37□□□□□ -1.39
COPS3-204ENST00000462236 IL13P35225 146 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 IGFALSP35858 605 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 MROH9Q5TGP6 573 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 SAPCD2Q86UD0 394 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 ABHD4Q8TB40 342 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 DPF3Q92784 378 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 TMEM169Q96HH4 297 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 PSMD1Q99460 953 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 ZNF277Q9NRM2 450 aaPredicted RBP6.37□□□□□ -1.39
COPS3-204ENST00000462236 IMPACTQ9P2X3 320 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 ABT1Q9ULW3 272 aaKnown RBP6.37□□□□□ -1.39
COPS3-204ENST00000462236 TRAF6Q9Y4K3 522 aa6.37□□□□□ -1.39
COPS3-204ENST00000462236 OAS3Q9Y6K5 1087 aaKnown RBP6.37□□□□□ -1.39
COPS3-204ENST00000462236 HEG1Q9ULI3 1381 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 FAM47E-STBD1D6RA91 191 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 SRGAP3O43295 1099 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 MSCO60682 206 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 NPR1P16066 1061 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 PRKCAP17252 672 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 IL6STP40189 918 aaPredicted RBP6.36□□□□□ -1.39
COPS3-204ENST00000462236 BCL6P41182 706 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 IARSP41252 1262 aaKnown RBP6.36□□□□□ -1.39
COPS3-204ENST00000462236 CYP4F8P98187 520 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 MVKQ03426 396 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 SULT6B1Q6IMI4 303 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 OLFM4Q6UX06 510 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 NBPF11Q86T75 865 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 CABP7Q86V35 215 aa6.36□□□□□ -1.39
COPS3-204ENST00000462236 AHI1Q8N157 1196 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms