RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 CASP1P29466 404 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 PSMC6P62333 389 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 SMAD3P84022 425 aaKnown RBP16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 CELF3Q5SZQ8 465 aaKnown RBP16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 FAM160B1Q5W0V3 765 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 ISM2Q6H9L7 571 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 OTUD6AQ7L8S5 288 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 GAS2L3Q86XJ1 694 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 C4orf19Q8IY42 314 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 TMEM199Q8N511 208 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 DEFB123Q8N688 67 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 MLKLQ8NB16 471 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 LRRC15Q8TF66 581 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 COPS5Q92905 334 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 DNAJC25Q9H1X3 360 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 BHMT2Q9H2M3 363 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 EXOC1Q9NV70 894 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 GABBR1Q9UBS5 961 aa16.87■□□□□ 0.29
TMEM39A-203ENST00000461654 PVALEFA0A1B0GWK0 134 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 ARHGEF35A5YM69 484 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 GH1P01241 217 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 ZNF165P49910 485 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 PTPN11Q06124 597 aaPredicted RBP16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 ARHGAP1Q07960 439 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 PPIGQ13427 754 aaKnown RBP eCLIP16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 LAMC2Q13753 1193 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 MORC3Q14149 939 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 KCNB1Q14721 858 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 L1TD1Q5T7N2 865 aaKnown RBP16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 SWSAP1Q6NVH7 229 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 CNNM4Q6P4Q7 775 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 ABHD15Q6UXT9 468 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 DYMQ7RTS9 669 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 CCDC65Q8IXS2 484 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 FAM200AQ8TCP9 573 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 PIGOQ8TEQ8 1089 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 SEPT1Q8WYJ6 367 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 DDX12PQ92771 950 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 EMID1Q96A84 441 aaPredicted RBP16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 SPATA33Q96N06 139 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 AZI2Q9H6S1 392 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 MTMR10Q9NXD2 777 aa16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 DBR1Q9UK59 544 aaKnown RBP16.86■□□□□ 0.29
TMEM39A-203ENST00000461654 MYMKA6NI61 221 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 B4GALT4O60513 344 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 ATG7O95352 703 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 MYL3P08590 195 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 IDEP14735 1019 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 MRE11P49959 708 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 SLC12A3P55017 1021 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 NFRKBQ6P4R8 1299 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 UNC13DQ70J99 1090 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 C16orf59Q7L2K0 433 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 RNF214Q8ND24 703 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 TRPV6Q9H1D0 765 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 BCAS3Q9H6U6 928 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 ZNF302Q9NR11 478 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 ANKEF1Q9NU02 776 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 KCND2Q9NZV8 630 aa16.85■□□□□ 0.29
TMEM39A-203ENST00000461654 A0A087WWV3 80 aa16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 FSD2A1L4K1 749 aa16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 BECN2A8MW95 431 aa16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 TBCAO75347 108 aaKnown RBP16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 CSF2RAP15509 400 aa16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 CYP11B2P19099 503 aa16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 YWHABP31946 246 aaKnown RBP16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 STIM1Q13586 685 aa16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 DPCR1Q3MIW9 517 aa16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 KMT5BQ4FZB7 885 aa16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 CT47A1Q5JQC4 288 aaPredicted RBP16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 ZNF658Q5TYW1 1059 aaPredicted RBP16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 AFG1LQ8WV93 481 aa16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 RNPC3Q96LT9 517 aaKnown RBP16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 NOC4LQ9BVI4 516 aaKnown RBP16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 RBSNQ9H1K0 784 aa16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 HIPK3Q9H422 1215 aa16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 GRPEL1Q9HAV7 217 aa16.84■□□□□ 0.29
TMEM39A-203ENST00000461654 GSTTP1A0A1W2PQM5 241 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 GOLGA6L19H0YKK7 550 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 RHOBTB3O94955 611 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 MMP3P08254 477 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 TCF7P36402 384 aaPredicted RBP16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 PPP1R2P41236 205 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 TPM4P67936 248 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 PSMD2Q13200 908 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 UGCGQ16739 394 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 NBPF20Q3BBV1 942 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 XKR9Q5GH70 373 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 XKR3Q5GH77 459 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 TMEM240Q5SV17 173 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 RASIP1Q5U651 963 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 Q7L0L9 218 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 SESTD1Q86VW0 696 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 BPIFA3Q9BQP9 254 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.83■□□□□ 0.287e-8■■■■□ 20.4
TMEM39A-203ENST00000461654 PPP1R12CQ9BZL4 782 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 PANK4Q9NVE7 773 aa16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 WRAP73Q9P2S5 460 aaPredicted RBP16.83■□□□□ 0.28
TMEM39A-203ENST00000461654 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.82■□□□□ 0.28
TMEM39A-203ENST00000461654 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms