RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 B3GNT9Q6UX72 402 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 CYFIP1Q7L576 1253 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 EEPD1Q7L9B9 569 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 HS2ST1Q7LGA3 356 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 CACNA2D4Q7Z3S7 1137 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 C4orf19Q8IY42 314 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 TC2NQ8N9U0 490 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 NEK11Q8NG66 645 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 CEP170P1Q96L14 293 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 DRC1Q96MC2 740 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 INPP4AQ96PE3 977 aaPredicted RBP7.48□□□□□ -1.21
MSH2-204ENST00000461394 SH2D3AQ9BRG2 576 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 NDST4Q9H3R1 872 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 ANKEF1Q9NU02 776 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 TYW1Q9NV66 732 aaKnown RBP7.48□□□□□ -1.21
MSH2-204ENST00000461394 LARSQ9P2J5 1176 aaKnown RBP7.48□□□□□ -1.21
MSH2-204ENST00000461394 PLXNA1Q9UIW2 1896 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 LUC7L2Q9Y383 392 aaKnown RBP7.48□□□□□ -1.21
MSH2-204ENST00000461394 PCDHA2Q9Y5H9 948 aa7.48□□□□□ -1.21
MSH2-204ENST00000461394 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.48□□□□□ -1.21
MSH2-204ENST00000461394 TRPM7Q96QT4 1865 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 TMEM150BA6NC51 233 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 SOWAHBA6NEL2 793 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 SOWAHDA6NJG2 315 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 CCDC169A6NNP5 214 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 SPATA31C2B4DYI2 1134 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 KIF2AO00139 706 aaPredicted RBP7.47□□□□□ -1.21
MSH2-204ENST00000461394 PDHXO00330 501 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 PDXKO00764 312 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 CNMDO75829 334 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 LYPLA2O95372 231 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 GYPCP04921 128 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 PGK2P07205 417 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 SUPT20HL2P0C7V6 817 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 CYP2C8P10632 490 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 KCNA2P16389 499 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 GJA5P36382 358 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 KCNJ6P48051 423 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 RARRES1P49788 294 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 KLK7P49862 253 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 FXR1P51114 621 aaKnown RBP eCLIP7.47□□□□□ -1.21
MSH2-204ENST00000461394 CYP2J2P51589 502 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 ACTR2P61160 394 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 ERVK-9P63128 1117 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 ERVK-24P63145 666 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 FKBP1BP68106 108 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 PRKCEQ02156 737 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 MTERF2Q49AM1 385 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 ZC2HC1CQ53FD0 456 aaPredicted RBP7.47□□□□□ -1.21
MSH2-204ENST00000461394 FAM160B1Q5W0V3 765 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 GPAT2Q6NUI2 795 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 FOXR2Q6PJQ5 311 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 CYP26C1Q6V0L0 522 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 LRRC55Q6ZSA7 311 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 TMTC1Q8IUR5 882 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 KSR1Q8IVT5 923 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 GPRC5AQ8NFJ5 357 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 ZNF507Q8TCN5 953 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 IQCDQ96DY2 449 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 PPP1R13BQ96KQ4 1090 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 PHF12Q96QT6 1004 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 ACCSQ96QU6 501 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 SENP7Q9BQF6 1050 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 TIPINQ9BVW5 301 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 LSM14BQ9BX40 385 aaKnown RBP7.47□□□□□ -1.21
MSH2-204ENST00000461394 KCTD10Q9H3F6 313 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 MROH8Q9H579 483 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 MLXIPQ9HAP2 919 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 ZNF302Q9NR11 478 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 OLFML3Q9NRN5 406 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 ABHD10Q9NUJ1 306 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 RBPJLQ9UBG7 517 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 ARMCX3Q9UH62 379 aaPredicted RBP7.47□□□□□ -1.21
MSH2-204ENST00000461394 FAM184BQ9ULE4 1060 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 FRMD4BQ9Y2L6 1034 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 PPP2R2CQ9Y2T4 447 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 IVNS1ABPQ9Y6Y0 642 aa7.47□□□□□ -1.21
MSH2-204ENST00000461394 TTC26A0AVF1 554 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 GOLGA6L9A6NEM1 432 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 UNCXA6NJT0 531 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 NOP56O00567 594 aaKnown RBP7.46□□□□□ -1.22
MSH2-204ENST00000461394 SLC16A4O15374 487 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 SLC16A3O15427 465 aaKnown RBP7.46□□□□□ -1.22
MSH2-204ENST00000461394 IPO7O95373 1038 aaKnown RBP7.46□□□□□ -1.22
MSH2-204ENST00000461394 GGPS1O95749 300 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 CCDC175P0C221 793 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 XRCC5P13010 732 aaKnown RBP7.46□□□□□ -1.22
MSH2-204ENST00000461394 KRT13P13646 458 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 PLS3P13797 630 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 SMTNP53814 917 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 POLGP54098 1239 aaPredicted RBP7.46□□□□□ -1.22
MSH2-204ENST00000461394 NPEPPSP55786 919 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 PEX3P56589 373 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 PPP2R3AQ06190 1150 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 DMP1Q13316 513 aaPredicted RBP7.46□□□□□ -1.22
MSH2-204ENST00000461394 ALCAMQ13740 583 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 NEDD9Q14511 834 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 BMT2Q1RMZ1 405 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 Q3C1V9 767 aa7.46□□□□□ -1.22
MSH2-204ENST00000461394 ZCWPW2Q504Y3 356 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms