RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 IPO9Q96P70 1041 aaKnown RBP9.13□□□□□ -0.95
SND1-202ENST00000461056 CCSER1Q9C0I3 900 aa9.13□□□□□ -0.95
SND1-202ENST00000461056 NRBP2Q9NSY0 501 aa9.13□□□□□ -0.95
SND1-202ENST00000461056 TMEM39AQ9NV64 488 aa9.13□□□□□ -0.95
SND1-202ENST00000461056 PCDHA7Q9UN72 937 aa9.13□□□□□ -0.95
SND1-202ENST00000461056 DDX11L8A8MPP1 907 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 TLR3O15455 904 aaKnown RBP9.12□□□□□ -0.95
SND1-202ENST00000461056 MAGEB2O15479 319 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 MARCH6O60337 910 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 DKC1O60832 514 aaKnown RBP eCLIP9.12□□□□□ -0.95
SND1-202ENST00000461056 IQCF3P0C7M6 154 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 CCT6AP40227 531 aaKnown RBP9.12□□□□□ -0.95
SND1-202ENST00000461056 RFC5P40937 340 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 CLCN3P51790 818 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 SLC12A3P55017 1021 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 CHMP4BP1P59074 171 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 IGBP1P78318 339 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 FOXD4L6Q3SYB3 417 aaPredicted RBP9.12□□□□□ -0.95
SND1-202ENST00000461056 SPECC1Q5M775 1068 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 RESP18Q5W5W9 173 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 FOXD4L3Q6VB84 417 aaPredicted RBP9.12□□□□□ -0.95
SND1-202ENST00000461056 CLEC17AQ6ZS10 378 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 LRRC8DQ7L1W4 858 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 ERMNQ8TAM6 284 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 KCNG4Q8TDN1 519 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 TMEM40Q8WWA1 233 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 BADQ92934 168 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 NACC1Q96RE7 527 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 RAB34Q9BZG1 259 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 CDHR5Q9HBB8 845 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 DDX19AQ9NUU7 478 aaKnown RBP9.12□□□□□ -0.95
SND1-202ENST00000461056 DAXXQ9UER7 740 aaPredicted RBP9.12□□□□□ -0.95
SND1-202ENST00000461056 SEPT9Q9UHD8 586 aaPredicted RBP9.12□□□□□ -0.95
SND1-202ENST00000461056 KIAA1024Q9UPX6 916 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 NR2E3Q9Y5X4 410 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 STK24Q9Y6E0 443 aa9.12□□□□□ -0.95
SND1-202ENST00000461056 E9PMD0 336 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 MAP3K13O43283 966 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 CUTAO60888 179 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 EYA4O95677 639 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 CSF2RAP15509 400 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 CYP11B2P19099 503 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 PLCG1P19174 1290 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 BMP8BP34820 402 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 ARL2P36404 184 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 VASPP50552 380 aaPredicted RBP9.11□□□□□ -0.95
SND1-202ENST00000461056 MRPS6P82932 125 aaKnown RBP9.11□□□□□ -0.95
SND1-202ENST00000461056 BFSP2Q13515 415 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 LPIN1Q14693 890 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 EMC2Q15006 297 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 KARSQ15046 597 aaKnown RBP9.11□□□□□ -0.95
SND1-202ENST00000461056 STK38Q15208 465 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 MTERF2Q49AM1 385 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 ARSHQ5FYA8 562 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 KRT79Q5XKE5 535 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 C1orf186Q6ZWK4 172 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 CABP7Q86V35 215 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 CKAP2LQ8IYA6 745 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 NME8Q8N427 588 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 LRRC71Q8N4P6 559 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 TMEM87AQ8NBN3 555 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 DNAJB3Q8WWF6 145 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 BSNDQ8WZ55 320 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 TNPO1Q92973 898 aaKnown RBP9.11□□□□□ -0.95
SND1-202ENST00000461056 SCLYQ96I15 445 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 CEP170P1Q96L14 293 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 MTRQ99707 1265 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 RUSC1Q9BVN2 902 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 PPP1R12CQ9BZL4 782 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 PRDM5Q9NQX1 630 aaPredicted RBP9.11□□□□□ -0.95
SND1-202ENST00000461056 CFAP45Q9UL16 551 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 HPSEQ9Y251 543 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 TANC1Q9C0D5 1861 aa9.11□□□□□ -0.95
SND1-202ENST00000461056 MYH15Q9Y2K3 1946 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 DGAT1O75907 488 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 RPLP2P05387 115 aaKnown RBP9.1□□□□□ -0.95
SND1-202ENST00000461056 GUCY2CP25092 1073 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 RFC2P35250 354 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 THPOP40225 353 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 GPC3P51654 580 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 CCL23P55773 120 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 KRT85P78386 507 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 TBC1D8BQ0IIM8 1120 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 XKR9Q5GH70 373 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 FBXO47Q5MNV8 452 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 TMEM240Q5SV17 173 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 PRPF38BQ5VTL8 546 aaKnown RBP9.1□□□□□ -0.95
SND1-202ENST00000461056 EFCAB12Q6NXP0 572 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 PADI6Q6TGC4 694 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 IFNLR1Q8IU57 520 aaPredicted RBP9.1□□□□□ -0.95
SND1-202ENST00000461056 CRIPAKQ8N1N5 446 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 SYT2Q8N9I0 419 aaPredicted RBP9.1□□□□□ -0.95
SND1-202ENST00000461056 ASAP3Q8TDY4 903 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 LINC01599Q8WXQ3 324 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 RAD54LQ92698 747 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 KCNN1Q92952 543 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 FAM49AQ9H0Q0 323 aaPredicted RBP9.1□□□□□ -0.95
SND1-202ENST00000461056 BHMT2Q9H2M3 363 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 GOLPH3LQ9H4A5 285 aa9.1□□□□□ -0.95
SND1-202ENST00000461056 AGO3Q9H9G7 860 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms