RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 KRT18P05783 430 aaKnown RBP11.31□□□□□ -0.6
UPF2-204ENST00000460569 SLFN14P0C7P3 912 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 CYP2C9P11712 490 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 PTMSP20962 102 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 KLRC1P26715 233 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 AFMP43652 599 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 RAD51AP2Q09MP3 1159 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 PTGISQ16647 500 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 TRIM60Q495X7 471 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 MARCH8Q5T0T0 291 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 RINT1Q6NUQ1 792 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 MTHFD1LQ6UB35 978 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 SLC39A5Q6ZMH5 540 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 MAEAQ7L5Y9 396 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 EXOC8Q8IYI6 725 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 GRAMD1CQ8IYS0 662 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 LRRC71Q8N4P6 559 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 METTL13Q8N6R0 699 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 RETREG2Q8NC44 543 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 CCDC34Q96HJ3 373 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 CEP89Q96ST8 783 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 MTRQ99707 1265 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 JPH2Q9BR39 696 aaPredicted RBP11.31□□□□□ -0.6
UPF2-204ENST00000460569 TNMDQ9H2S6 317 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 DHX33Q9H6R0 707 aaKnown RBP11.31□□□□□ -0.6
UPF2-204ENST00000460569 SUGCTQ9HAC7 445 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 TRMT13Q9NUP7 481 aaKnown RBP11.31□□□□□ -0.6
UPF2-204ENST00000460569 DACT1Q9NYF0 836 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 BRCA2P51587 3418 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 MROH7Q68CQ1 1323 aa11.31□□□□□ -0.6
UPF2-204ENST00000460569 NPHP3-ACAD11A0A0J9YXS1 232 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 MBLAC1A4D2B0 266 aaPredicted RBP11.3□□□□□ -0.6
UPF2-204ENST00000460569 TLR3O15455 904 aaKnown RBP11.3□□□□□ -0.6
UPF2-204ENST00000460569 GAS2O43903 313 aaKnown RBP11.3□□□□□ -0.6
UPF2-204ENST00000460569 B4GALT4O60513 344 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 MAFO75444 373 aaPredicted RBP11.3□□□□□ -0.6
UPF2-204ENST00000460569 CYP11B2P19099 503 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 CDK7P50613 346 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 CLCN3P51790 818 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 RTP1P59025 263 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 ADAM17P78536 824 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 AMPD3Q01432 767 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 SNX17Q15036 470 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 FAM102BQ5T8I3 360 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 EFCAB12Q6NXP0 572 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 RUFY4Q6ZNE9 571 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 C1orf186Q6ZWK4 172 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 UBE2Q1Q7Z7E8 422 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 FAM126BQ8IXS8 530 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 MCPH1Q8NEM0 835 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 GPT2Q8TD30 523 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 PAGE5Q96GU1 130 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 LRRC27Q9C0I9 530 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 FAM49AQ9H0Q0 323 aaPredicted RBP11.3□□□□□ -0.6
UPF2-204ENST00000460569 TRPV6Q9H1D0 765 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 XPNPEP1Q9NQW7 623 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 KBTBD4Q9NVX7 518 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 KCND2Q9NZV8 630 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 ATP11BQ9Y2G3 1177 aa11.3□□□□□ -0.6
UPF2-204ENST00000460569 TANC1Q9C0D5 1861 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 IGKV6-21A0A0C4DH24 114 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 MYMKA6NI61 221 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 DCDC2CA8MYV0 355 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 HIP1RO75146 1068 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 TBCAO75347 108 aaKnown RBP11.29□□□□□ -0.6
UPF2-204ENST00000460569 TMOD1P28289 359 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 DNM2P50570 870 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 CACNB1Q02641 598 aaPredicted RBP11.29□□□□□ -0.6
UPF2-204ENST00000460569 NFKBIBQ15653 356 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 LRRC26Q2I0M4 334 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 ARSHQ5FYA8 562 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 KANK3Q6NY19 840 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 DYMQ7RTS9 669 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 SERINC5Q86VE9 423 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 TCP11Q8WWU5 503 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 DDX12PQ92771 950 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 TMEM143Q96AN5 459 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 TIGD1Q96MW7 591 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 MAP7D2Q96T17 732 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 REEP2Q9BRK0 252 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 TIPINQ9BVW5 301 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
UPF2-204ENST00000460569 BLZF1Q9H2G9 400 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 GPRC5CQ9NQ84 441 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 HOOK1Q9UJC3 728 aaKnown RBP11.29□□□□□ -0.6
UPF2-204ENST00000460569 AKT3Q9Y243 479 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 PCDHA2Q9Y5H9 948 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 SIP14410 1827 aa11.29□□□□□ -0.6
UPF2-204ENST00000460569 SMIM35A0A1B0GVV1 85 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 RSPH10B2B2RC85 870 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 GTPBP6O43824 516 aaPredicted RBP11.28□□□□□ -0.6
UPF2-204ENST00000460569 FAM13AO94988 1023 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 RSPH10BP0C881 870 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 IDEP14735 1019 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 GUCY2CP25092 1073 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 CASP1P29466 404 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 ASIC1P78348 528 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 TLE2Q04725 743 aa11.28□□□□□ -0.6
UPF2-204ENST00000460569 PTK7Q13308 1070 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms