RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, human

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-215	ENST00000460158	NECAB2	Q7Z6G3	386 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	RASSF3	Q86WH2	238 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	NME9	Q86XW9	330 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	CMIP	Q8IY22	773 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	ZNF526	Q8TF50	670 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	STAG1	Q8WVM7	1258 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	UBE2Q2	Q8WVN8	375 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	MAML3	Q96JK9	1138 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	TUBGCP5	Q96RT8	1024 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	ZDHHC5	Q9C0B5	715 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	POFUT1	Q9H488	388 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	KCND1	Q9NSA2	647 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	HOMER2	Q9NSB8	354 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	MSRA	Q9UJ68	235 aa		4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	NOC2L	Q9Y3T9	749 aa	Known RBP	4.58	□□□□□ -1.68
VPS8-215	ENST00000460158	WASHC2C	Q9Y4E1	1318 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158		A0A1B0GTL3	188 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	ALG1L2	C9J202	215 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	RAB11FIP3	O75154	756 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	FBXO21	O94952	628 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	COL6A1	P12109	1028 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	IL13RA1	P78552	427 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	MTMR1	Q13613	665 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	MYBPC3	Q14896	1274 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	PDCD1	Q15116	288 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	PRR31	Q5SQ13	230 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	PRAMEF9	Q5VWM5	478 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	FRMD7	Q6ZUT3	714 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	FRMD5	Q7Z6J6	570 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	SAPCD2	Q86UD0	394 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	PHYKPL	Q8IUZ5	450 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	ANKRD13A	Q8IZ07	590 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	ADGRG2	Q8IZP9	1017 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	CNTD1	Q8N815	330 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	C7orf31	Q8N865	590 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	E2F7	Q96AV8	911 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	FOXB1	Q99853	325 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	MYL10	Q9BUA6	226 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	BTBD2	Q9BX70	525 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	KRTAP17-1	Q9BYP8	105 aa		4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	DDX56	Q9NY93	547 aa	Known RBP	4.57	□□□□□ -1.68
VPS8-215	ENST00000460158	ELL2	O00472	640 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	FFAR3	O14843	346 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	KDM1A	O60341	852 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	PRPF6	O94906	941 aa	Known RBP	4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	APOL3	O95236	402 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	KNG1	P01042	644 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	IL13	P35225	146 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	ROM1	Q03395	351 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	ITK	Q08881	620 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	STIL	Q15468	1287 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	VMAC	Q2NL98	169 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	BRDT	Q58F21	947 aa	Predicted RBP	4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	KANK2	Q63ZY3	851 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	SLFN12L	Q6IEE8	588 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	UNQ6494/PRO21346	Q6UXR6	183 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	GGN	Q86UU5	652 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	ZDHHC14	Q8IZN3	488 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	CALML6	Q8TD86	181 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	WRNIP1	Q96S55	665 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	ANO3	Q9BYT9	981 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	PUS7L	Q9H0K6	701 aa	Known RBP	4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	OR10A5	Q9H207	317 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	ADAMTS20	P59510	1910 aa		4.56	□□□□□ -1.68
VPS8-215	ENST00000460158	ARID4B	Q4LE39	1312 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	DDX3X	O00571	662 aa	Known RBP eCLIP	4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	CYP7B1	O75881	506 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	CLEC2L	P0C7M8	214 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	ZNF28	P17035	718 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	RPL13	P26373	211 aa	Known RBP	4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	SCAND1	P57086	179 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	ERVK-21	P61565	698 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	CD83	Q01151	205 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	ADCY2	Q08462	1091 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	EFEMP1	Q12805	493 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	MOGS	Q13724	837 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	WDR72	Q3MJ13	1102 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	SPATS1	Q496A3	300 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	ZBTB41	Q5SVQ8	909 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	TIGD7	Q6NT04	549 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	TRMT10B	Q6PF06	316 aa	Known RBP	4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	DPP8	Q6V1X1	898 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	TTLL7	Q6ZT98	887 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	ESPNL	Q6ZVH7	1005 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	KANSL1	Q7Z3B3	1105 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	FERMT3	Q86UX7	667 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	CXorf67	Q86X51	503 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	TP53I13	Q8NBR0	393 aa	Predicted RBP	4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	SYT8	Q8NBV8	401 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	MTMR8	Q96EF0	704 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	AHCYL2	Q96HN2	611 aa	Known RBP	4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	C14orf119	Q9NWQ9	140 aa		4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	USP36	Q9P275	1121 aa	Known RBP	4.55	□□□□□ -1.68
VPS8-215	ENST00000460158	PRSS38	A1L453	326 aa		4.54	□□□□□ -1.68
VPS8-215	ENST00000460158	SH3D21	A4FU49	640 aa		4.54	□□□□□ -1.68
VPS8-215	ENST00000460158	GOLGA8A	A7E2F4	631 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms