RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 IQCF3P0C7M6 154 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 CSF2RAP15509 400 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 ME1P48163 572 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 DNM2P50570 870 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 POLGP54098 1239 aaPredicted RBP12.11□□□□□ -0.47
CCDC12-204ENST00000460035 KRT85P78386 507 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 FPGSQ05932 587 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 PPIGQ13427 754 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC12-204ENST00000460035 HYIQ5T013 277 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 IER5Q5VY09 327 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 LRRC8DQ7L1W4 858 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 DEFB128Q7Z7B8 93 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 EXOC8Q8IYI6 725 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 KIAA0319LQ8IZA0 1049 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 NME8Q8N427 588 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 KCTD17Q8N5Z5 321 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 SLC7A3Q8WY07 619 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 EPSTI1Q96J88 318 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 IPO9Q96P70 1041 aaKnown RBP12.11□□□□□ -0.47
CCDC12-204ENST00000460035 MAP7D2Q96T17 732 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 PPP1R16BQ96T49 567 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 JPH2Q9BR39 696 aaPredicted RBP12.11□□□□□ -0.47
CCDC12-204ENST00000460035 WNT8AQ9H1J5 351 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 BMP2KQ9NSY1 1161 aaPredicted RBP12.11□□□□□ -0.47
CCDC12-204ENST00000460035 RCOR1Q9UKL0 485 aa12.11□□□□□ -0.47
CCDC12-204ENST00000460035 TTC3P53804 2025 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 E9PMD0 336 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 MAFO75444 373 aaPredicted RBP12.1□□□□□ -0.47
CCDC12-204ENST00000460035 TXLNAP40222 546 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 RFC5P40937 340 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 CLCN3P51790 818 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 MRPS6P82932 125 aaKnown RBP12.1□□□□□ -0.47
CCDC12-204ENST00000460035 TPRNQ4KMQ1 711 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 RPUSD2Q8IZ73 545 aaKnown RBP12.1□□□□□ -0.47
CCDC12-204ENST00000460035 LINC01465Q8N7H1 131 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 KCNG4Q8TDN1 519 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 SPATA32Q96LK8 384 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 PNMA5Q96PV4 448 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 PANK2Q9BZ23 570 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 UBE2OQ9C0C9 1292 aaKnown RBP12.1□□□□□ -0.47
CCDC12-204ENST00000460035 NT5C3AQ9H0P0 336 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 CHMP5Q9NZZ3 219 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 SUCLA2Q9P2R7 463 aaPredicted RBP12.1□□□□□ -0.47
CCDC12-204ENST00000460035 DBR1Q9UK59 544 aaKnown RBP12.1□□□□□ -0.47
CCDC12-204ENST00000460035 AKT3Q9Y243 479 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 GINS2Q9Y248 185 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 KDM3AQ9Y4C1 1321 aa12.1□□□□□ -0.47
CCDC12-204ENST00000460035 IGKV6-21A0A0C4DH24 114 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 CUTAO60888 179 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 PARNO95453 639 aaKnown RBP12.09□□□□□ -0.47
CCDC12-204ENST00000460035 CHRNA1P02708 482 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 VTNP04004 478 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 SSBP05455 408 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCDC12-204ENST00000460035 ACRP10323 421 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 RARRES1P49788 294 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 GRB10Q13322 594 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 EMC2Q15006 297 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 KARSQ15046 597 aaKnown RBP12.09□□□□□ -0.47
CCDC12-204ENST00000460035 FAM26DQ5JW98 314 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 TRAF7Q6Q0C0 670 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 PADI6Q6TGC4 694 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 CHRDL2Q6WN34 429 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 USP49Q70CQ1 688 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 MAEAQ7L5Y9 396 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 LEO1Q8WVC0 666 aaPredicted RBP12.09□□□□□ -0.47
CCDC12-204ENST00000460035 SYMPKQ92797 1274 aaKnown RBP12.09□□□□□ -0.47
CCDC12-204ENST00000460035 TMEM143Q96AN5 459 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 ZNF668Q96K58 619 aaPredicted RBP12.09□□□□□ -0.47
CCDC12-204ENST00000460035 SCLT1Q96NL6 688 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 CELF4Q9BZC1 486 aaKnown RBP12.09□□□□□ -0.47
CCDC12-204ENST00000460035 CCSER1Q9C0I3 900 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 BHMT2Q9H2M3 363 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 DHX33Q9H6R0 707 aaKnown RBP12.09□□□□□ -0.47
CCDC12-204ENST00000460035 IL23AQ9NPF7 189 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 CCDC39Q9UFE4 941 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 PCDHA7Q9UN72 937 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 TRPV2Q9Y5S1 764 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 CDY2AQ9Y6F7 541 aa12.09□□□□□ -0.47
CCDC12-204ENST00000460035 GAS2O43903 313 aaKnown RBP12.08□□□□□ -0.48
CCDC12-204ENST00000460035 USO1O60763 962 aaKnown RBP12.08□□□□□ -0.48
CCDC12-204ENST00000460035 DGAT1O75907 488 aa12.08□□□□□ -0.48
CCDC12-204ENST00000460035 EYA4O95677 639 aa12.08□□□□□ -0.48
CCDC12-204ENST00000460035 RFC2P35250 354 aa12.08□□□□□ -0.48
CCDC12-204ENST00000460035 NLRP11P59045 1033 aaKnown RBP12.08□□□□□ -0.48
CCDC12-204ENST00000460035 MKRN4PQ13434 485 aaPredicted RBP12.08□□□□□ -0.48
CCDC12-204ENST00000460035 DRP2Q13474 957 aa12.08□□□□□ -0.48
CCDC12-204ENST00000460035 DHX8Q14562 1220 aaKnown RBP12.08□□□□□ -0.48
CCDC12-204ENST00000460035 TMEM119Q4V9L6 283 aa12.08□□□□□ -0.48
CCDC12-204ENST00000460035 RRAGBQ5VZM2 374 aa12.08□□□□□ -0.48
CCDC12-204ENST00000460035 KCNK18Q7Z418 384 aa12.08□□□□□ -0.48
CCDC12-204ENST00000460035 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
CCDC12-204ENST00000460035 TCP11Q8WWU5 503 aa12.08□□□□□ -0.48
CCDC12-204ENST00000460035 MTRQ99707 1265 aa12.08□□□□□ -0.48
CCDC12-204ENST00000460035 GDF15Q99988 308 aa12.08□□□□□ -0.48
CCDC12-204ENST00000460035 SCAND2PQ9GZW5 306 aaPredicted RBP12.08□□□□□ -0.48
CCDC12-204ENST00000460035 ATP6V0A4Q9HBG4 840 aa12.08□□□□□ -0.48
CCDC12-204ENST00000460035 TRIP11Q15643 1979 aa12.07□□□□□ -0.48
CCDC12-204ENST00000460035 NBNO60934 754 aa12.07□□□□□ -0.48
CCDC12-204ENST00000460035 FGBP02675 491 aa12.07□□□□□ -0.48
CCDC12-204ENST00000460035 PLCG1P19174 1290 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms