RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 PPARAQ07869 468 aa10.49□□□□□ -0.73
UFD1-205ENST00000459854 C2orf54Q08AI8 447 aa10.49□□□□□ -0.73
UFD1-205ENST00000459854 PRKG1Q13976 671 aa10.49□□□□□ -0.73
UFD1-205ENST00000459854 LCORLQ8N3X6 602 aa10.49□□□□□ -0.73
UFD1-205ENST00000459854 GIPC2Q8TF65 315 aa10.49□□□□□ -0.73
UFD1-205ENST00000459854 UIMC1Q96RL1 719 aa10.49□□□□□ -0.73
UFD1-205ENST00000459854 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.49□□□□□ -0.73
UFD1-205ENST00000459854 TRPC6Q9Y210 931 aa10.49□□□□□ -0.73
UFD1-205ENST00000459854 AFG3L2Q9Y4W6 797 aa10.49□□□□□ -0.73
UFD1-205ENST00000459854 ENTPD3O75355 529 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 GGCXP38435 758 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 ZNF658Q5TYW1 1059 aaPredicted RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 RINT1Q6NUQ1 792 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 SEPT8Q92599 483 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 ZDHHC15Q96MV8 337 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 MXD3Q9BW11 206 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 NCOA5Q9HCD5 579 aaKnown RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 TAF1LQ8IZX4 1826 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 HSPD1P10809 573 aaKnown RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 STAT2P52630 851 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 USP14P54578 494 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 ART3Q13508 389 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 ADRM1Q16186 407 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 SLC44A4Q53GD3 710 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 ACBD5Q5T8D3 534 aaPredicted RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 OSBP2Q969R2 916 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 PLIN2Q99541 437 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 MRIQ9BWK5 157 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 SEPT10Q9P0V9 454 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 SERPINB13Q9UIV8 391 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 SNX5Q9Y5X3 404 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 B4E1Z4 1266 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 EIF3HO15372 352 aaKnown RBP eCLIP10.48□□□□□ -0.73
UFD1-205ENST00000459854 MFAP3LO75121 409 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 YY1P25490 414 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 DR1Q01658 176 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 CDR2Q01850 454 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 DAB2IPQ5VWQ8 1189 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 WDR75Q8IWA0 830 aaKnown RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 SH3RF3Q8TEJ3 882 aaPredicted RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 LRRC37BQ96QE4 947 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 TRIM56Q9BRZ2 755 aaKnown RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 PUS7LQ9H0K6 701 aaKnown RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 SCHIP1Q9P0W5 487 aaPredicted RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 ZNF70Q9UC06 446 aaPredicted RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 ZFP69BQ9UJL9 534 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 HAUS5O94927 633 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 KRT75O95678 551 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 RAD23BP54727 409 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 C11orf57Q6ZUT1 292 aaPredicted RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 RAB44Q7Z6P3 723 aaPredicted RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 CRLF3Q8IUI8 442 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 STRBPQ96SI9 672 aaKnown RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 MRGBPQ9NV56 204 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 GGA3Q9NZ52 723 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 IPO11Q9UI26 975 aaKnown RBP10.48□□□□□ -0.73
UFD1-205ENST00000459854 PCDHA5Q9Y5H7 936 aa10.48□□□□□ -0.73
UFD1-205ENST00000459854 GPR75-ASB3A0A0A6YYF3 556 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 MIF4GDA9UHW6 222 aaKnown RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 EEF1B2P24534 225 aaKnown RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 NSFP46459 744 aaKnown RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 MRPS25P82663 173 aaKnown RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 GRM1Q13255 1194 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 CUL4BQ13620 913 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 RARS2Q5T160 578 aaKnown RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 SAMD7Q7Z3H4 446 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 CNOT6LQ96LI5 555 aaKnown RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 ECT2Q9H8V3 914 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 GPRC5DQ9NZD1 345 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 NUP188Q5SRE5 1749 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 PPP1R37O75864 691 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 PLTPP55058 493 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 POLR2FP61218 127 aaKnown RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 ANGEL2Q5VTE6 544 aaKnown RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 SENP1Q9P0U3 644 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 USTQ9Y2C2 406 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 CCDC22O60826 627 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 CCDC159P0C7I6 412 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 HSPA9P38646 679 aaKnown RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 TXKP42681 527 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 CERKLQ49MI3 558 aaPredicted RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 HNRNPLLQ8WVV9 542 aaKnown RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 ZNF341Q9BYN7 854 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 KIF9Q9HAQ2 790 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 ZNF148Q9UQR1 794 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 PPP2R3BQ9Y5P8 575 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 SPDYE2BA6NHP3 402 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 M0R2C6 588 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 DAB1O75553 588 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 SPDYE6P0CI01 402 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 ACADSP16219 412 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 PPP4CP60510 307 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 ACTN3Q08043 901 aaPredicted RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 TCP11X2Q5H9J9 407 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 AKNAD1Q5T1N1 836 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 NUDCD1Q96RS6 583 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 MRPL44Q9H9J2 332 aaKnown RBP10.47□□□□□ -0.73
UFD1-205ENST00000459854 RRAGCQ9HB90 399 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 PCDHA13Q9Y5I0 950 aa10.47□□□□□ -0.73
UFD1-205ENST00000459854 ANKRD36CQ5JPF3 1778 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms