RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 PNMA5Q96PV4 448 aa14.8□□□□□ -0.04
TOP3B-213ENST00000457179 OSBPL9Q96SU4 736 aa14.8□□□□□ -0.04
TOP3B-213ENST00000457179 PAGR1Q9BTK6 254 aa14.8□□□□□ -0.04
TOP3B-213ENST00000457179 YIPF3Q9GZM5 350 aa14.8□□□□□ -0.04
TOP3B-213ENST00000457179 BLOC1S4Q9NUP1 217 aa14.8□□□□□ -0.04
TOP3B-213ENST00000457179 ANO9A1A5B4 782 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 KLHL33A6NCF5 533 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 RASSF10A6NK89 507 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 ENTPD3O75355 529 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 PAFAH1B1P43034 410 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 AMPD3Q01432 767 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 PLS1Q14651 629 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 TRADDQ15628 312 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 SEC16BQ96JE7 1060 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 MTMR9Q96QG7 549 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 SH3GL3Q99963 347 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 CPSF2Q9P2I0 782 aaKnown RBP14.79□□□□□ -0.04
TOP3B-213ENST00000457179 GMNCA6NCL1 334 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 LAD1O00515 517 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 HEXIM1O94992 359 aaKnown RBP14.79□□□□□ -0.04
TOP3B-213ENST00000457179 ALAS1P13196 640 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 PRPHP41219 470 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 DRP2Q13474 957 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 CACNA2D3Q8IZS8 1091 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 SPDYE1Q8NFV5 336 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-213ENST00000457179 HVCN1Q96D96 273 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 PURBQ96QR8 312 aaKnown RBP14.79□□□□□ -0.04
TOP3B-213ENST00000457179 CAPN11Q9UMQ6 739 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 PLAAQ9Y263 795 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 BICDL2A1A5D9 508 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 TACC1O75410 805 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 UPP2O95045 317 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 ATP6V1G2O95670 118 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 MYBL1P10243 752 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 SPA17Q15506 151 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 TPH2Q8IWU9 490 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 IQCKQ8N0W5 287 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 NLGN2Q8NFZ4 835 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 CAVIN3Q969G5 261 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 DHTKD1Q96HY7 919 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-213ENST00000457179 AK8Q96MA6 479 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 NLRC4Q9NPP4 1024 aa14.79□□□□□ -0.04
TOP3B-213ENST00000457179 CTDP1Q9Y5B0 961 aaPredicted RBP14.79□□□□□ -0.04
TOP3B-213ENST00000457179 COL11A2P13942 1736 aaPredicted RBP14.78□□□□□ -0.04
TOP3B-213ENST00000457179 GMPSP49915 693 aaPredicted RBP14.78□□□□□ -0.04
TOP3B-213ENST00000457179 ITGB3BPQ13352 177 aaPredicted RBP14.78□□□□□ -0.04
TOP3B-213ENST00000457179 CTTNQ14247 550 aaKnown RBP14.78□□□□□ -0.04
TOP3B-213ENST00000457179 NBPF12Q5TAG4 269 aaPredicted RBP14.78□□□□□ -0.04
TOP3B-213ENST00000457179 CNNM4Q6P4Q7 775 aa14.78□□□□□ -0.04
TOP3B-213ENST00000457179 DCAF4Q8WV16 495 aa14.78□□□□□ -0.04
TOP3B-213ENST00000457179 SAAL1Q96ER3 474 aa14.78□□□□□ -0.04
TOP3B-213ENST00000457179 FGFBP2Q9BYJ0 223 aa14.78□□□□□ -0.04
TOP3B-213ENST00000457179 ESYT2A0FGR8 921 aa14.78□□□□□ -0.04
TOP3B-213ENST00000457179 PHF20L1A8MW92 1017 aa14.78□□□□□ -0.04
TOP3B-213ENST00000457179 ARID5AQ03989 594 aa14.78□□□□□ -0.04
TOP3B-213ENST00000457179 HLTFQ14527 1009 aaKnown RBP eCLIP14.78□□□□□ -0.04
TOP3B-213ENST00000457179 CPLX4Q7Z7G2 160 aa14.78□□□□□ -0.04
TOP3B-213ENST00000457179 GPBP1Q86WP2 473 aa14.78□□□□□ -0.04
TOP3B-213ENST00000457179 IFT20Q8IY31 132 aa14.78□□□□□ -0.04
TOP3B-213ENST00000457179 CCDC42Q96M95 316 aa14.78□□□□□ -0.04
TOP3B-213ENST00000457179 DNAJC7Q99615 494 aa14.78□□□□□ -0.04
TOP3B-213ENST00000457179 CNOT7Q9UIV1 285 aaKnown RBP14.78□□□□□ -0.04
TOP3B-213ENST00000457179 FLOT1O75955 427 aa14.77□□□□□ -0.04
TOP3B-213ENST00000457179 SPP2Q13103 211 aa14.77□□□□□ -0.04
TOP3B-213ENST00000457179 GRIPAP1Q4V328 841 aa14.77□□□□□ -0.04
TOP3B-213ENST00000457179 MIIPQ5JXC2 388 aa14.77□□□□□ -0.04
TOP3B-213ENST00000457179 CAPRIN2Q6IMN6 1127 aaKnown RBP14.77□□□□□ -0.04
TOP3B-213ENST00000457179 C7orf25Q9BPX7 421 aa14.77□□□□□ -0.04
TOP3B-213ENST00000457179 ETAA1Q9NY74 926 aa14.77□□□□□ -0.04
TOP3B-213ENST00000457179 NFKBIEO00221 500 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 PEX10O60683 326 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 MED24O75448 989 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 NOVP48745 357 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 SLC8A3P57103 927 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 SPDYE2Q495Y8 402 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 THEMIS2Q5TEJ8 643 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 ARMC3Q5W041 872 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 NSMFQ6X4W1 530 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 ARHGAP27Q6ZUM4 889 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 RRAGAQ7L523 313 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 TRIM58Q8NG06 486 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 PIK3R5Q8WYR1 880 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 NUP58Q9BVL2 599 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.05
TOP3B-213ENST00000457179 GOPCQ9HD26 462 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 IRAK4Q9NWZ3 460 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 TRAF5O00463 557 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 KIF4AO95239 1232 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 SMARCA1P28370 1054 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 ELF3P78545 371 aaPredicted RBP14.77□□□□□ -0.05
TOP3B-213ENST00000457179 ADCY2Q08462 1091 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 PAK2Q13177 524 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 BZW1Q7L1Q6 419 aaKnown RBP14.77□□□□□ -0.05
TOP3B-213ENST00000457179 MKL1Q969V6 931 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 IFIH1Q9BYX4 1025 aaKnown RBP14.77□□□□□ -0.05
TOP3B-213ENST00000457179 BHMT2Q9H2M3 363 aa14.77□□□□□ -0.05
TOP3B-213ENST00000457179 HERC5Q9UII4 1024 aaKnown RBP14.77□□□□□ -0.05
TOP3B-213ENST00000457179 LAMB1P07942 1786 aa14.76□□□□□ -0.05
TOP3B-213ENST00000457179 BUB1O43683 1085 aa14.76□□□□□ -0.05
TOP3B-213ENST00000457179 SPAG5Q96R06 1193 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms