RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 KRT79Q5XKE5 535 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 FITM2Q8N6M3 262 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 U2AF1L4Q8WU68 220 aaKnown RBP11.18□□□□□ -0.62
CLIP4-208ENST00000456385 CEP63Q96MT8 703 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 KCTD10Q9H3F6 313 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 CCDC134Q9H6E4 229 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 MKNK2Q9HBH9 465 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 HDAC9Q9UKV0 1011 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 USP15Q9Y4E8 981 aaPredicted RBP11.18□□□□□ -0.62
CLIP4-208ENST00000456385 CCDC88AQ3V6T2 1871 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 TOGARAM1Q9Y4F4 1720 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 ZNF142P52746 1687 aaPredicted RBP11.18□□□□□ -0.62
CLIP4-208ENST00000456385 H2AFZP0C0S5 128 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 LINGO3P0C6S8 592 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 ATF3P18847 181 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 PON1P27169 355 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 PDE6CP51160 858 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 GALCP54803 685 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 MARSP56192 900 aaKnown RBP11.18□□□□□ -0.62
CLIP4-208ENST00000456385 BNIP1Q12981 228 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 SBK1Q52WX2 424 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 H2AFVQ71UI9 128 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 REXO1Q8N1G1 1221 aaKnown RBP11.18□□□□□ -0.62
CLIP4-208ENST00000456385 CNKSR1Q969H4 720 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 C18orf8Q96DM3 657 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 PIGSQ96S52 555 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 AMFRQ9UKV5 643 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 CORO1CQ9ULV4 474 aaPredicted RBP11.18□□□□□ -0.62
CLIP4-208ENST00000456385 PCDHA2Q9Y5H9 948 aa11.18□□□□□ -0.62
CLIP4-208ENST00000456385 IGSF9BQ9UPX0 1349 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 E9PMD0 336 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 KIAA0391O15091 583 aaKnown RBP11.17□□□□□ -0.62
CLIP4-208ENST00000456385 DDX3YO15523 660 aaKnown RBP11.17□□□□□ -0.62
CLIP4-208ENST00000456385 AP1G2O75843 785 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 GNA14O95837 355 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 AGTP01019 485 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 ATP2A2P16615 1042 aaKnown RBP11.17□□□□□ -0.62
CLIP4-208ENST00000456385 ABCB4P21439 1286 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 NR2F2P24468 414 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 BRD2P25440 801 aaKnown RBP11.17□□□□□ -0.62
CLIP4-208ENST00000456385 BLMHQ13867 455 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 TMEM266Q2M3C6 531 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 TMEM119Q4V9L6 283 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 HERC4Q5GLZ8 1057 aaPredicted RBP11.17□□□□□ -0.62
CLIP4-208ENST00000456385 KIAA1755Q5JYT7 1200 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 SOGA3Q5TF21 947 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 TRIM68Q6AZZ1 485 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 JAMLQ86YT9 394 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 SLC35G2Q8TBE7 412 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 DYDC1Q8WWB3 177 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 SH3GL3Q99963 347 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 NSRP1Q9H0G5 558 aaKnown RBP11.17□□□□□ -0.62
CLIP4-208ENST00000456385 ZHX3Q9H4I2 956 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 ARHGEF3Q9NR81 526 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 GRHL1Q9NZI5 618 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 NENFQ9UMX5 172 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 BZW2Q9Y6E2 419 aaKnown RBP11.17□□□□□ -0.62
CLIP4-208ENST00000456385 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.17□□□□□ -0.62
CLIP4-208ENST00000456385 KRT13P13646 458 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 CASP5P51878 434 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 ICA1Q05084 483 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 AUHQ13825 339 aaKnown RBP11.17□□□□□ -0.62
CLIP4-208ENST00000456385 SLMAPQ14BN4 828 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 EXOC3L4Q17RC7 722 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 DCAF17Q5H9S7 520 aaPredicted RBP11.17□□□□□ -0.62
CLIP4-208ENST00000456385 SPDYCQ5MJ68 293 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 C6orf118Q5T5N4 469 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 NUGGCQ68CJ6 796 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 EXOC3L1Q86VI1 746 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 SLC17A8Q8NDX2 589 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 RMDN2Q96LZ7 410 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 UBA5Q9GZZ9 404 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 EMILIN3Q9NT22 766 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 TMOD4Q9NZQ9 345 aa11.17□□□□□ -0.62
CLIP4-208ENST00000456385 NKX1-2Q9UD57 310 aaPredicted RBP11.17□□□□□ -0.62
CLIP4-208ENST00000456385 ANKRD36CQ5JPF3 1778 aa11.16□□□□□ -0.62
CLIP4-208ENST00000456385 PLCG2P16885 1265 aa11.16□□□□□ -0.62
CLIP4-208ENST00000456385 RPL21P46778 160 aaKnown RBP11.16□□□□□ -0.62
CLIP4-208ENST00000456385 ZNF131P52739 623 aa11.16□□□□□ -0.62
CLIP4-208ENST00000456385 RNASELQ05823 741 aaKnown RBP11.16□□□□□ -0.62
CLIP4-208ENST00000456385 MKRN4PQ13434 485 aaPredicted RBP11.16□□□□□ -0.62
CLIP4-208ENST00000456385 FOXR2Q6PJQ5 311 aa11.16□□□□□ -0.62
CLIP4-208ENST00000456385 BARGINQ6ZT62 677 aa11.16□□□□□ -0.62
CLIP4-208ENST00000456385 C3orf67Q6ZVT6 689 aa11.16□□□□□ -0.62
CLIP4-208ENST00000456385 COL23A1Q86Y22 540 aaPredicted RBP11.16□□□□□ -0.62
CLIP4-208ENST00000456385 SYCE1Q8N0S2 351 aa11.16□□□□□ -0.62
CLIP4-208ENST00000456385 ALG3Q92685 438 aa11.16□□□□□ -0.62
CLIP4-208ENST00000456385 TFCP2L1Q9NZI6 479 aa11.16□□□□□ -0.62
CLIP4-208ENST00000456385 A6NHS1 94 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 RASGRF2O14827 1237 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 GFPT2O94808 682 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 GH1P01241 217 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 IL6STP40189 918 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-208ENST00000456385 PRKCIP41743 596 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 MAP2K1Q02750 393 aaPredicted RBP11.15□□□□□ -0.62
CLIP4-208ENST00000456385 ADCY2Q08462 1091 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 MAPK7Q13164 816 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 SNX1Q13596 522 aa11.15□□□□□ -0.62
CLIP4-208ENST00000456385 PDIA5Q14554 519 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms