RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 RAVER1Q8IY67 606 aaKnown RBP4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 TRIM58Q8NG06 486 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 ARHGEF26Q96DR7 871 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 KIAA1683Q9H0B3 1180 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 RNPEPL1Q9HAU8 725 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 NMRK1Q9NWW6 199 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 LRP6O75581 1613 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 HMGB1P1B2RPK0 211 aaPredicted RBP4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 ENTPD3O75355 529 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 KRT36O76013 467 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 PLCG1P19174 1290 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 FGFR4P22455 802 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 TARSP26639 723 aaKnown RBP4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 CTBSQ01459 385 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 CYP4A11Q02928 519 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 GK3PQ14409 553 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 EFTUD2Q15029 972 aaKnown RBP eCLIP4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 DIXDC1Q155Q3 683 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 NDNQ99608 321 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 THAP9Q9H5L6 903 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 ETNK1Q9HBU6 452 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 ANKIB1Q9P2G1 1089 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 SLIT1O75093 1534 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 NUP205Q92621 2012 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 CNTNAP5Q8WYK1 1306 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 FAM196BA6NMK8 535 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 FOXD2O60548 495 aaPredicted RBP4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 GNAT2P19087 354 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 USP11P51784 963 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 C3orf67Q6ZVT6 689 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 CCDC50Q8IVM0 306 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 SYCP3Q8IZU3 236 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 CNKSR2Q8WXI2 1034 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 C18orf8Q96DM3 657 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 PNMA5Q96PV4 448 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 OSBPL1AQ9BXW6 950 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 RGL1Q9NZL6 768 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 NFAT5O94916 1531 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 KIF3CO14782 793 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 TFAP2AP05549 437 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 PLCG2P16885 1265 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 CALB2P22676 271 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 PSMC4P43686 418 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 PAK2Q13177 524 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 TUBB2AQ13885 445 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 ZYXQ15942 572 aaKnown RBP4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 ARHGAP27Q6ZUM4 889 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 DTX3LQ8TDB6 740 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 RPGRIP1Q96KN7 1286 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 TRIM47Q96LD4 638 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 HAPLN3Q96S86 360 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 MKNK1Q9BUB5 465 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 TUBB2BQ9BVA1 445 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 FBXO6Q9NRD1 293 aaPredicted RBP4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 TAS2R1Q9NYW7 299 aa4.94□□□□□ -1.62
DEPDC1-202ENST00000456315 HSF2BPO75031 334 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 PPFIA2O75334 1257 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 TAC1P20366 129 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 RPL21P46778 160 aaKnown RBP4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 POLE2P56282 527 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 DYNLL1P63167 89 aaKnown RBP4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 DNAJC3Q13217 504 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 TTC38Q5R3I4 469 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 NT5DC3Q86UY8 548 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 SLC44A5Q8NCS7 719 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 NUCKS1Q9H1E3 243 aaKnown RBP4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 DNAAF2Q9NVR5 837 aaKnown RBP4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 CPSF2Q9P2I0 782 aaKnown RBP4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 MEGF6O75095 1541 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 AHCYL1O43865 530 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 TJP3O95049 919 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 CALCAP01258 141 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 GCAP28676 217 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 USP8P40818 1118 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 IL15P40933 162 aaPredicted RBP4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 CASP4P49662 377 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 PLTPP55058 493 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 GAD2Q05329 585 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 MOGSQ13724 837 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 SIX1Q15475 284 aaPredicted RBP4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 NAB2Q15742 525 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 RTN1Q16799 776 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 LONRF1Q17RB8 773 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 INF2Q27J81 1249 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 SCARA3Q6AZY7 606 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 DYMQ7RTS9 669 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 SLFN11Q7Z7L1 901 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 DNAJC19Q96DA6 116 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 CLPTM1LQ96KA5 538 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 IL17RBQ9NRM6 502 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 TOPAZ1Q8N9V7 1692 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 TJP1Q07157 1748 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 GTPBP6O43824 516 aaPredicted RBP4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 CEP104O60308 925 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 OPA1O60313 960 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 USP1O94782 785 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 CCNE1P24864 410 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 CHKAP35790 457 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 BCAMP50895 628 aa4.93□□□□□ -1.62
DEPDC1-202ENST00000456315 TRAF1Q13077 416 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms