RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 HOXB8P17481 243 aaPredicted RBP5.57□□□□□ -1.52
CSMD3-204ENST00000455883 CUL4AQ13619 759 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 NUGGCQ68CJ6 796 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 ARMCX2Q7L311 632 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 FAM178BQ8IXR5 827 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 PLEKHA5Q9HAU0 1116 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 LRWD1Q9UFC0 647 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 SLC4A4Q9Y6R1 1079 aa5.57□□□□□ -1.52
CSMD3-204ENST00000455883 KCNQ3O43525 872 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 CLCN2P51788 898 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 KMT5BQ4FZB7 885 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 SLC44A4Q53GD3 710 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 TRIM8Q9BZR9 551 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 WNT8AQ9H1J5 351 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 VPS33BQ9H267 617 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 PDE11AQ9HCR9 933 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 GNGT2O14610 69 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 HGSO14964 777 aaPredicted RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 BRAFP15056 766 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 ICA1Q05084 483 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 COG2Q14746 738 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 HDDC2Q7Z4H3 204 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 ABTB1Q969K4 478 aaPredicted RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 PDLIM2Q96JY6 352 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 KATNAL1Q9BW62 490 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 EPN3Q9H201 632 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 ZSWIM6Q9HCJ5 1215 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 TIMMDC1Q9NPL8 285 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 EFCAB6Q5THR3 1501 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 PSMD3O43242 534 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 PRKAA2P54646 552 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 ENKURQ8TC29 256 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 TSSK1BQ9BXA7 367 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 NMRK1Q9NWW6 199 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 ATP10BO94823 1461 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 WDR64B1ANS9 1081 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 CBFA2T3O75081 653 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 PMS2P54278 862 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 PDE1BQ01064 536 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 DR1Q01658 176 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 TFDP2Q14188 446 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 EXOC3L4Q17RC7 722 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 KLHL12Q53G59 568 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 NLRP9Q7RTR0 991 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 VTI1BQ9UEU0 232 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 OVOS2A0A0G2JMS6 1433 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 LDHAP00338 332 aaKnown RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 EEF1B2P24534 225 aaKnown RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 CNTFP26441 200 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 STILQ15468 1287 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 LUZP2Q86TE4 346 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 ATP6V1G3Q96LB4 118 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 NUP153P49790 1475 aaKnown RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 PTPRTO14522 1441 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 HERC4Q5GLZ8 1057 aaPredicted RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 TRIM68Q6AZZ1 485 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 CDR2LQ86X02 465 aaPredicted RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 PARP9Q8IXQ6 854 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 AADATQ8N5Z0 425 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 SYT2Q8N9I0 419 aaPredicted RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 NFATC2IPQ8NCF5 419 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 RNF169Q8NCN4 708 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 OSCP1Q8WVF1 389 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 NAF1Q96HR8 494 aaKnown RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 SRPRBQ9Y5M8 271 aaKnown RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 HNRNPCL2B2RXH8 293 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 STX7O15400 261 aaKnown RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 CCNT1O60563 726 aaKnown RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 SERPINB9P50453 376 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 PPP2R2AP63151 447 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 MRPS15P82914 257 aaKnown RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 ZNF555Q8NEP9 628 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 PLBD2Q8NHP8 589 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 TUBGCP2Q9BSJ2 902 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 MTO1Q9Y2Z2 717 aaKnown RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 DLC1Q96QB1 1528 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 MEFVO15553 781 aaPredicted RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 ATP2C2O75185 946 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 GDF11O95390 407 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 SLC1A4P43007 532 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 LRMPQ12912 555 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 ZNF658Q5TYW1 1059 aaPredicted RBP5.56□□□□□ -1.52
CSMD3-204ENST00000455883 DCAF15Q66K64 600 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 MICALL2Q8IY33 904 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 NEDD4LQ96PU5 975 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 SLCO1B7G3V0H7 640 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 CCT8P50990 548 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 XIAPP98170 497 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 GOLGA8FQ08AF8 430 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 GOLGA8DPQ0D2H9 430 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 PRMT9Q6P2P2 845 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 FAM167AQ96KS9 214 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 CAAP1Q9H8G2 361 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 KLC4Q9NSK0 619 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 A0A1W2PP64 1363 aa5.56□□□□□ -1.52
CSMD3-204ENST00000455883 SSU72P8A0A1W2PR75 194 aa5.55□□□□□ -1.52
CSMD3-204ENST00000455883 TK2O00142 265 aa5.55□□□□□ -1.52
CSMD3-204ENST00000455883 EYA2O00167 538 aa5.55□□□□□ -1.52
CSMD3-204ENST00000455883 CC2D2BQ6DHV5 1058 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms