RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 JAM2P57087 298 aa3.65□□□□□ -1.83
LINC02540-201ENST00000455554 C21orf58P58505 322 aa3.65□□□□□ -1.83
LINC02540-201ENST00000455554 ATP2C1P98194 919 aaPredicted RBP3.65□□□□□ -1.83
LINC02540-201ENST00000455554 ADAM15Q13444 863 aa3.65□□□□□ -1.83
LINC02540-201ENST00000455554 MTDHQ86UE4 582 aaKnown RBP3.65□□□□□ -1.83
LINC02540-201ENST00000455554 VRK3Q8IV63 474 aa3.65□□□□□ -1.83
LINC02540-201ENST00000455554 SYNE4Q8N205 404 aa3.65□□□□□ -1.83
LINC02540-201ENST00000455554 ZNF276Q8N554 614 aa3.65□□□□□ -1.83
LINC02540-201ENST00000455554 ST7Q9NRC1 585 aa3.65□□□□□ -1.83
LINC02540-201ENST00000455554 ADARB2Q9NS39 739 aaKnown RBP3.65□□□□□ -1.83
LINC02540-201ENST00000455554 VWA7Q9Y334 891 aa3.65□□□□□ -1.83
LINC02540-201ENST00000455554 TRAF6Q9Y4K3 522 aa3.65□□□□□ -1.83
LINC02540-201ENST00000455554 ZAR1LA6NP61 321 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 ZNF561-AS1K7EIQ3 104 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 MMEP08473 750 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 PYGMP11217 842 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 KRTAP10-11P60412 298 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 ST5P78524 1137 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 SMAD3P84022 425 aaKnown RBP3.64□□□□□ -1.83
LINC02540-201ENST00000455554 MAP3K12Q12852 859 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 PTPAQ15257 358 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 ELAVL1Q15717 326 aaKnown RBP3.64□□□□□ -1.83
LINC02540-201ENST00000455554 CRY1Q16526 586 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 RABL3Q5HYI8 236 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 YOD1Q5VVQ6 348 aaPredicted RBP3.64□□□□□ -1.83
LINC02540-201ENST00000455554 SYCE2Q6PIF2 218 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 GAREM2Q75VX8 874 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 RHOUQ7L0Q8 258 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 C16orf59Q7L2K0 433 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 CELF2-AS1Q8N7Q2 184 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 PCDH19Q8TAB3 1148 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 MLST8Q9BVC4 326 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 SLC6A15Q9H2J7 730 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 ZNF408Q9H9D4 720 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 PODXL2Q9NZ53 605 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 KIAA1522Q9P206 1035 aaPredicted RBP3.64□□□□□ -1.83
LINC02540-201ENST00000455554 CBLCQ9ULV8 474 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 R3HCC1Q9Y3T6 440 aaKnown RBP3.64□□□□□ -1.83
LINC02540-201ENST00000455554 XDHP47989 1333 aa3.64□□□□□ -1.83
LINC02540-201ENST00000455554 KCNK3O14649 394 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 GSTA4O15217 222 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 MAFO75444 373 aaPredicted RBP3.63□□□□□ -1.83
LINC02540-201ENST00000455554 SESN2P58004 480 aaPredicted RBP3.63□□□□□ -1.83
LINC02540-201ENST00000455554 SEC23AQ15436 765 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 DDR2Q16832 855 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 LY6G5CQ5SRR4 150 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 KLHDC10Q6PID8 442 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 FAM111BQ6SJ93 734 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 MAMDC2Q7Z304 686 aaPredicted RBP3.63□□□□□ -1.83
LINC02540-201ENST00000455554 ADGRG3Q86Y34 549 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 BCL6BQ8N143 479 aaPredicted RBP3.63□□□□□ -1.83
LINC02540-201ENST00000455554 LRRC47Q8N1G4 583 aaKnown RBP3.63□□□□□ -1.83
LINC02540-201ENST00000455554 HIPK4Q8NE63 616 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 PROKR1Q8TCW9 393 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 ASB15Q8WXK1 588 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 SLC7A6OSQ96CW6 309 aaPredicted RBP3.63□□□□□ -1.83
LINC02540-201ENST00000455554 MRRFQ96E11 262 aaKnown RBP3.63□□□□□ -1.83
LINC02540-201ENST00000455554 BBC3Q96PG8 261 aaPredicted RBP3.63□□□□□ -1.83
LINC02540-201ENST00000455554 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.63□□□□□ -1.83
LINC02540-201ENST00000455554 SMURF1Q9HCE7 757 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 TRPS1Q9UHF7 1281 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 FZD1Q9UP38 647 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 PCDHA8Q9Y5H6 950 aa3.63□□□□□ -1.83
LINC02540-201ENST00000455554 PRAMEF22A3QJZ6 481 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 KLRG2A4D1S0 409 aaPredicted RBP3.62□□□□□ -1.83
LINC02540-201ENST00000455554 GRID2IPA4D2P6 1211 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 UNCXA6NJT0 531 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 GOLGA6L6A8MZA4 724 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 ARVCFO00192 962 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 PPFIA4O75335 1185 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 H2AFYO75367 372 aaKnown RBP3.62□□□□□ -1.83
LINC02540-201ENST00000455554 ABHD16AO95870 558 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 ITGB1P05556 798 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 APEX1P27695 318 aaKnown RBP3.62□□□□□ -1.83
LINC02540-201ENST00000455554 CD38P28907 300 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 RABGGTBP53611 331 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 STRIP1Q5VSL9 837 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 ST13P5Q8NFI4 369 aaPredicted RBP3.62□□□□□ -1.83
LINC02540-201ENST00000455554 CALML6Q8TD86 181 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 THAP3Q8WTV1 239 aaPredicted RBP3.62□□□□□ -1.83
LINC02540-201ENST00000455554 HNRNPLLQ8WVV9 542 aaKnown RBP3.62□□□□□ -1.83
LINC02540-201ENST00000455554 GCDHQ92947 438 aaPredicted RBP3.62□□□□□ -1.83
LINC02540-201ENST00000455554 GFM2Q969S9 779 aaKnown RBP3.62□□□□□ -1.83
LINC02540-201ENST00000455554 RPL10LQ96L21 214 aaKnown RBP3.62□□□□□ -1.83
LINC02540-201ENST00000455554 GBP4Q96PP9 640 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 GPHA2Q96T91 129 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 ASB1Q9Y576 335 aa3.62□□□□□ -1.83
LINC02540-201ENST00000455554 A0A0A6YYK5 440 aaPredicted RBP3.61□□□□□ -1.83
LINC02540-201ENST00000455554 UBE2QL1A1L167 161 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 CCDC66A2RUB6 948 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 GOLGA8BA8MQT2 603 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 FOXP2O15409 715 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 SRGAP2CP0DJJ0 459 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 NAT1P18440 290 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 NR4A1P22736 598 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 PTTG1IPP53801 180 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 BPIFB4P59827 614 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 GUCY1A3Q02108 690 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 TM4SF20Q53R12 229 aa3.61□□□□□ -1.83
LINC02540-201ENST00000455554 FAM47CQ5HY64 1035 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms