RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 DCP1AQ9NPI6 582 aaPredicted RBP4.63□□□□□ -1.67
RBM39-220ENST00000455343 CNNM1Q9NRU3 951 aa4.63□□□□□ -1.67
RBM39-220ENST00000455343 REV1Q9UBZ9 1251 aa4.63□□□□□ -1.67
RBM39-220ENST00000455343 AGTPBP1Q9UPW5 1226 aa4.63□□□□□ -1.67
RBM39-220ENST00000455343 POLR3KQ9Y2Y1 108 aaPredicted RBP4.63□□□□□ -1.67
RBM39-220ENST00000455343 PCDHA11Q9Y5I1 949 aa4.63□□□□□ -1.67
RBM39-220ENST00000455343 MAST3O60307 1309 aa4.63□□□□□ -1.67
RBM39-220ENST00000455343 KIF16BQ96L93 1317 aa4.63□□□□□ -1.67
RBM39-220ENST00000455343 MYBBP1AQ9BQG0 1328 aaKnown RBP4.63□□□□□ -1.67
RBM39-220ENST00000455343 XIRP2A4UGR9 3374 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 RBM47A0AV96 593 aaKnown RBP4.62□□□□□ -1.67
RBM39-220ENST00000455343 GRM8O00222 908 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 SORBS3O60504 671 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 CTNND1O60716 968 aaKnown RBP4.62□□□□□ -1.67
RBM39-220ENST00000455343 PDE8BO95263 885 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 HTR3BO95264 441 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 MED14OSP0DP75 135 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 FGFR2P21802 821 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 GCLCP48506 637 aaPredicted RBP4.62□□□□□ -1.67
RBM39-220ENST00000455343 TCP10Q12799 353 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 CHAF1AQ13111 956 aaPredicted RBP4.62□□□□□ -1.67
RBM39-220ENST00000455343 WDR43Q15061 677 aaKnown RBP eCLIP4.62□□□□□ -1.67
RBM39-220ENST00000455343 TWISTNBQ3B726 338 aaPredicted RBP4.62□□□□□ -1.67
RBM39-220ENST00000455343 RABL6Q3YEC7 729 aaPredicted RBP4.62□□□□□ -1.67
RBM39-220ENST00000455343 CAVIN4Q5BKX8 364 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 MAFAQ8NHW3 353 aaPredicted RBP4.62□□□□□ -1.67
RBM39-220ENST00000455343 BAHD1Q8TBE0 780 aaPredicted RBP4.62□□□□□ -1.67
RBM39-220ENST00000455343 SMCR8Q8TEV9 937 aaPredicted RBP4.62□□□□□ -1.67
RBM39-220ENST00000455343 USP6NLQ92738 828 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 KREMEN1Q96MU8 473 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 TMEM74Q96NL1 305 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 RSRP1Q9BUV0 290 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 ASPNQ9BXN1 380 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 IDI2Q9BXS1 227 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 TTYH1Q9H313 450 aaPredicted RBP4.62□□□□□ -1.67
RBM39-220ENST00000455343 CD320Q9NPF0 282 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 MORF4L1Q9UBU8 362 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 KLHL3Q9UH77 587 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 MROH5Q6ZUA9 1318 aa4.62□□□□□ -1.67
RBM39-220ENST00000455343 TRIM75PA6NK02 468 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 CHURC1-FNTBB4DL54 471 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 NPIPB6E9PJ23 425 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 DNAJA2O60884 412 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 ENTPD3O75355 529 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 VAMP4O75379 141 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 TMEM253P0C7T8 217 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 GARTP22102 1010 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 GLDCP23378 1020 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 GBP2P32456 591 aaPredicted RBP4.61□□□□□ -1.67
RBM39-220ENST00000455343 PLA2G5P39877 138 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 SMAD3P84022 425 aaKnown RBP4.61□□□□□ -1.67
RBM39-220ENST00000455343 FAM160A1Q05DH4 1040 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 CACNB2Q08289 660 aaPredicted RBP4.61□□□□□ -1.67
RBM39-220ENST00000455343 PWP1Q13610 501 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 MPP2Q14168 576 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 CCDC27Q2M243 656 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 LRRC24Q50LG9 513 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 TAF7LQ5H9L4 462 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 SNAP47Q5SQN1 464 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 TREML2Q5T2D2 321 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 GADL1Q6ZQY3 521 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 REC114Q7Z4M0 266 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 VPS37DQ86XT2 251 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 SIAH1Q8IUQ4 282 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 RELL1Q8IUW5 271 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 LILRA2Q8N149 483 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 WDR66Q8TBY9 1149 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 DHX38Q92620 1227 aaKnown RBP4.61□□□□□ -1.67
RBM39-220ENST00000455343 TSR2Q969E8 191 aaKnown RBP4.61□□□□□ -1.67
RBM39-220ENST00000455343 CCDC74BQ96LY2 380 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 VTI1BQ9UEU0 232 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 RAPGEFL1Q9UHV5 662 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 UTYO14607 1347 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 RFX7Q2KHR2 1363 aa4.61□□□□□ -1.67
RBM39-220ENST00000455343 ARAP2Q8WZ64 1704 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 ECM29Q5VYK3 1845 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 SHISA3A0PJX4 238 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 FITM1A5D6W6 292 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 TCAF2A6NFQ2 919 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 DDTLA6NHG4 134 aaPredicted RBP4.6□□□□□ -1.67
RBM39-220ENST00000455343 ETV2O00321 342 aaPredicted RBP4.6□□□□□ -1.67
RBM39-220ENST00000455343 FRAT2O75474 233 aaPredicted RBP4.6□□□□□ -1.67
RBM39-220ENST00000455343 ALDH1L1O75891 902 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 ZSCAN22P10073 491 aaPredicted RBP4.6□□□□□ -1.67
RBM39-220ENST00000455343 CYP2B6P20813 491 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 PRDX5P30044 214 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 HOXA7P31268 230 aaPredicted RBP4.6□□□□□ -1.67
RBM39-220ENST00000455343 RGS3P49796 1198 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 TAGLNQ01995 201 aaKnown RBP4.6□□□□□ -1.67
RBM39-220ENST00000455343 TEKQ02763 1124 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 SHHQ15465 462 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 NR0B2Q15466 257 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 KCNA10Q16322 511 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 TIGD5Q53EQ6 642 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 C9orf50Q5SZB4 431 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 ATG14Q6ZNE5 492 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 IRF2BP1Q8IU81 584 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 PHACTR4Q8IZ21 702 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 OXR1Q8N573 874 aa4.6□□□□□ -1.67
RBM39-220ENST00000455343 GOLM1Q8NBJ4 401 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms