RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 RRN3P2A6NIE6 340 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 GOLGA8AA7E2F4 631 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 GOLGA8BA8MQT2 603 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 C9IYK1 514 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 NT5C1B-RDH14C9J2C7 533 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 H0Y858 1186 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 FSCN2O14926 492 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 NCK2O43639 380 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 B4GALT3O60512 393 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 GFRA3O60609 400 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 STAG3L1P0CL83 205 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MYBP10242 640 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CDC27P30260 824 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SREBF1P36956 1147 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 METAP2P50579 478 aaKnown RBP eCLIP6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 DRP2Q13474 957 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 RTN1Q16799 776 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PTPN21Q16825 1174 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ADCK5Q3MIX3 580 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CLLU1OSQ5K130 101 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SWSAP1Q6NVH7 229 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SYCE2Q6PIF2 218 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 LRRC55Q6ZSA7 311 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PLA2G4DQ86XP0 818 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 FBXL6Q8N531 539 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 C12orf76Q8N812 135 aaPredicted RBP6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 FANCBQ8NB91 859 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 BCL7CQ8WUZ0 217 aaPredicted RBP6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SUSD6Q92537 303 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SCLT1Q96NL6 688 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 NEK1Q96PY6 1258 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SH2D3AQ9BRG2 576 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 LZTS2Q9BRK4 669 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ESYT1Q9BSJ8 1104 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PHF7Q9BWX1 381 aaPredicted RBP6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 FTHL17Q9BXU8 183 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 POMKQ9H5K3 350 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CWH43Q9H720 699 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 RIC8AQ9NPQ8 531 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ZNF302Q9NR11 478 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 FAM217BQ9NTX9 383 aaPredicted RBP6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 AKT3Q9Y243 479 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PCDHB12Q9Y5F1 795 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 FRYLO94915 3013 aa6.82□□□□□ -1.32
HLA-DPA3-207ENST00000454398 NFASCO94856 1347 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 KDM3AQ9Y4C1 1321 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 IGLV3-22A0A075B6J6 115 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 KLF18A0A0U1RQI7 1052 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MEIS3P2A8K0S8 358 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 C2CD4DB7Z1M9 353 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 IPO5O00410 1097 aaKnown RBP6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 DHX15O43143 795 aaKnown RBP6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 DTNBO60941 627 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 GPR32O75388 356 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 BRD1O95696 1058 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CALM1P0DP23 149 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CALM2P0DP24 149 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CALM3P0DP25 149 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ATF7P17544 494 aaPredicted RBP6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ZNF76P36508 570 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 GNAQP50148 359 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PTPN5P54829 565 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PRKCEQ02156 737 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SIGLEC14Q08ET2 396 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PRR16Q569H4 304 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 RARS2Q5T160 578 aaKnown RBP6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ANKRD54Q6NXT1 300 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ABHD15Q6UXT9 468 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SLC24A5Q71RS6 500 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 PLPPR4Q7Z2D5 763 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 RASEFQ8IZ41 740 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 LRRC43Q8N309 656 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 KREMEN2Q8NCW0 462 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 HELQQ8TDG4 1101 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 LPPQ93052 612 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TMEM87BQ96K49 555 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MAP3K14Q99558 947 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 S1PR5Q9H228 398 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ATP6V0A4Q9HBG4 840 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 RGS18Q9NS28 235 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 BMP2KQ9NSY1 1161 aaPredicted RBP6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 GABBR1Q9UBS5 961 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 TCEAL9Q9UHQ7 104 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 HCFC2Q9Y5Z7 792 aa6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 V9GY48 417 aaPredicted RBP6.81□□□□□ -1.32
HLA-DPA3-207ENST00000454398 IGKV6D-21A0A0A0MT36 114 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SMCO2A6NFE2 343 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 MEIS1O00470 390 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ZBTB43O43298 467 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ZNF862O60290 1169 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 ZC3H11AO75152 810 aaKnown RBP eCLIP6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 SSBP05455 408 aaKnown RBP eCLIP6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 EPCAMP16422 314 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 LAG3P18627 525 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 LIFRP42702 1097 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 CLK2P49760 499 aaKnown RBP6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 NLRP11P59045 1033 aaKnown RBP6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 DSC3Q14574 896 aa6.8□□□□□ -1.32
HLA-DPA3-207ENST00000454398 FAM160B1Q5W0V3 765 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms