RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 C1QL4Q86Z23 238 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 LYSMD2Q8IV50 215 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 C7orf31Q8N865 590 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 ABHD4Q8TB40 342 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 E2F7Q96AV8 911 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 INTS4Q96HW7 963 aaKnown RBP4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 TEKT5Q96M29 485 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 FOXB1Q99853 325 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 ARNT2Q9HBZ2 717 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 DTLQ9NZJ0 730 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 KLHL14Q9P2G3 628 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 PPP2R3BQ9Y5P8 575 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 HCFC2Q9Y5Z7 792 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 NUMBLQ9Y6R0 609 aa4.91□□□□□ -1.62
HMGB1P15-201ENST00000453854 PRSS38A1L453 326 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 HRKO00198 91 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 NFIBO00712 420 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 PRPF6O94906 941 aaKnown RBP4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 TSPAN15O95858 294 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 PRLP01236 227 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 CT47B1P0C2W7 299 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 C1QTNF9P0C862 333 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 AKAP5P24588 427 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 MRPS9P82933 396 aaKnown RBP4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 ALDH6A1Q02252 535 aaKnown RBP4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 TCIRG1Q13488 830 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 MYBPC3Q14896 1274 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 PLEKHN1Q494U1 663 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 MINDY4Q4G0A6 757 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 PITRM1Q5JRX3 1037 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 ZBTB41Q5SVQ8 909 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 CD276Q5ZPR3 534 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 TTLL7Q6ZT98 887 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 SYDE1Q6ZW31 735 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 DGKHQ86XP1 1220 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 SLC41A1Q8IVJ1 513 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 EXOC8Q8IYI6 725 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 BHLHE22Q8NFJ8 381 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 MORC4Q8TE76 937 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 TGFBRAP1Q8WUH2 860 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 TOE1Q96GM8 510 aaKnown RBP4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 RAX2Q96IS3 184 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 DIRC2Q96SL1 478 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 MYL10Q9BUA6 226 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 ANO3Q9BYT9 981 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 POFUT1Q9H488 388 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 DNAJC28Q9NX36 388 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 OBP2AQ9NY56 170 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 INVSQ9Y283 1065 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 GPR45Q9Y5Y3 372 aa4.9□□□□□ -1.63
HMGB1P15-201ENST00000453854 NUDT19A8MXV4 375 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 HMGB1P1B2RPK0 211 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 XPOTO43592 962 aaKnown RBP4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 EIF3JO75822 258 aaKnown RBP4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 SDHBP21912 280 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 RAP1GAPP47736 663 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 SRSF2Q01130 221 aaKnown RBP4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 TMEM62Q0P6H9 643 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 RAB3GAP1Q15042 981 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 UGT8Q16880 541 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 CR1LQ2VPA4 569 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 CT83Q5H943 113 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 RRP12Q5JTH9 1297 aaKnown RBP4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 KIAA1841Q6NSI8 718 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 TIGD7Q6NT04 549 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 TEPPQ6URK8 271 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 ETV3LQ6ZN32 361 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 LCNL1Q6ZST4 164 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 AMIGO3Q86WK7 504 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 SMC5Q8IY18 1101 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 HIPK4Q8NE63 616 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 ZNF526Q8TF50 670 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 RSAD2Q8WXG1 361 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 CPA5Q8WXQ8 436 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 EAF2Q96CJ1 260 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 SLC39A13Q96H72 371 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 TUBGCP5Q96RT8 1024 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 SLC12A5Q9H2X9 1139 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 NSUN3Q9H649 340 aaKnown RBP4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 ANLNQ9NQW6 1124 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 DBR1Q9UK59 544 aaKnown RBP4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 ZBTB21Q9ULJ3 1066 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 CC2D2AQ9P2K1 1620 aa4.89□□□□□ -1.63
HMGB1P15-201ENST00000453854 PRAMEF22A3QJZ6 481 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 OR14I1A6ND48 311 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 ZNF839A8K0R7 811 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 ABLIM1O14639 778 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 ERC2O15083 957 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 MAFO75444 373 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 KRT18P05783 430 aaKnown RBP4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 ASGR2P07307 311 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 PFKMP08237 780 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 CLEC2LP0C7M8 214 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 MTHFD2P13995 350 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 C5AR1P21730 350 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 FBLN1P23142 703 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 PTGS1P23219 599 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 MC4RP32245 332 aa4.88□□□□□ -1.63
HMGB1P15-201ENST00000453854 ADKP55263 362 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms