RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 EYA4O95677 639 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 IQCF3P0C7M6 154 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 RSPH10BP0C881 870 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 ITGB8P26012 769 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 LRRC8DQ7L1W4 858 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 KIAA0319LQ8IZA0 1049 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 LEO1Q8WVC0 666 aaPredicted RBP16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 TCP11Q8WWU5 503 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 SYMPKQ92797 1274 aaKnown RBP16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 WNT8BQ93098 351 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 PNMA5Q96PV4 448 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 MAP7D2Q96T17 732 aa16.28■□□□□ 0.2
NCKIPSD-207ENST00000453349 UMODL1Q5DID0 1318 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 IGKV6-21A0A0C4DH24 114 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 RFC2P35250 354 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 CDC42EP1Q00587 391 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 MDM2Q00987 491 aaPredicted RBP16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 GRB10Q13322 594 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 PPIGQ13427 754 aaKnown RBP eCLIP16.27■□□□□ 0.27e-10■■■■■ 38.3
NCKIPSD-207ENST00000453349 KARSQ15046 597 aaKnown RBP16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 FAM26DQ5JW98 314 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 RPUSD2Q8IZ73 545 aaKnown RBP16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 ZNF710Q8N1W2 664 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 LRRC71Q8N4P6 559 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 SCLYQ96I15 445 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 CHAMP1Q96JM3 812 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 MTRQ99707 1265 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 BHMT2Q9H2M3 363 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 DHX33Q9H6R0 707 aaKnown RBP16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 FAM13BQ9NYF5 915 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 AKT3Q9Y243 479 aa16.27■□□□□ 0.2
NCKIPSD-207ENST00000453349 CLCN3P51790 818 aa16.26■□□□□ 0.19
NCKIPSD-207ENST00000453349 MRPS6P82932 125 aaKnown RBP16.26■□□□□ 0.19
NCKIPSD-207ENST00000453349 FPGSQ05932 587 aa16.26■□□□□ 0.19
NCKIPSD-207ENST00000453349 TMEM119Q4V9L6 283 aa16.26■□□□□ 0.19
NCKIPSD-207ENST00000453349 RRAGBQ5VZM2 374 aa16.26■□□□□ 0.19
NCKIPSD-207ENST00000453349 ADALQ6DHV7 355 aa16.26■□□□□ 0.19
NCKIPSD-207ENST00000453349 PADI6Q6TGC4 694 aa16.26■□□□□ 0.19
NCKIPSD-207ENST00000453349 USP49Q70CQ1 688 aa16.26■□□□□ 0.19
NCKIPSD-207ENST00000453349 CELF4Q9BZC1 486 aaKnown RBP16.26■□□□□ 0.19
NCKIPSD-207ENST00000453349 WNT8AQ9H1J5 351 aa16.26■□□□□ 0.19
NCKIPSD-207ENST00000453349 ATP6V0A4Q9HBG4 840 aa16.26■□□□□ 0.19
NCKIPSD-207ENST00000453349 SUCLA2Q9P2R7 463 aaPredicted RBP16.26■□□□□ 0.19
NCKIPSD-207ENST00000453349 ASAP2O43150 1006 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 USO1O60763 962 aaKnown RBP16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 VTNP04004 478 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 CTSHP09668 335 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 CSF2RAP15509 400 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 MAGEA10P43363 369 aaPredicted RBP16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 TMEM62Q0P6H9 643 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 EMC2Q15006 297 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 CSPP1Q1MSJ5 1256 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 AXDND1Q5T1B0 1012 aaPredicted RBP16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 CCDC73Q6ZRK6 1079 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 KCNK18Q7Z418 384 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 LINC01465Q8N7H1 131 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 SYT2Q8N9I0 419 aaPredicted RBP16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 MCPH1Q8NEM0 835 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 PANK2Q9BZ23 570 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 BMP2KQ9NSY1 1161 aaPredicted RBP16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 TRPV2Q9Y5S1 764 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 CDY2AQ9Y6F7 541 aa16.25■□□□□ 0.19
NCKIPSD-207ENST00000453349 TRIP12Q14669 1992 aaPredicted RBP16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 CHRNA1P02708 482 aa16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 SSBP05455 408 aaKnown RBP eCLIP16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 PLA2G4BP0C869 781 aa16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 CYP11B2P19099 503 aa16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 PLCG1P19174 1290 aa16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 NLRP11P59045 1033 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 SHC4Q6S5L8 630 aa16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 MAEAQ7L5Y9 396 aa16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 DEFB128Q7Z7B8 93 aa16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 RHPN2Q8IUC4 686 aa16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 PSPC1Q8WXF1 523 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 TMEM143Q96AN5 459 aa16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 IL23AQ9NPF7 189 aa16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 STK17AQ9UEE5 414 aa16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 GINS2Q9Y248 185 aa16.24■□□□□ 0.19
NCKIPSD-207ENST00000453349 GOLGA6L4A6NEF3 574 aa16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 PFKMP08237 780 aa16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 CRYBB1P53674 252 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 MGAT3Q09327 533 aa16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 MKRN4PQ13434 485 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 DHX8Q14562 1220 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 MXD4Q14582 209 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 FAM102BQ5T8I3 360 aa16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 TRAF7Q6Q0C0 670 aa16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 USP38Q8NB14 1042 aa16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 RAD54LQ92698 747 aa16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 SCLT1Q96NL6 688 aa16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 PPP1R16BQ96T49 567 aa16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 UBE2OQ9C0C9 1292 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 GDPD2Q9HCC8 539 aa16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 SQORQ9Y6N5 450 aa16.23■□□□□ 0.19
NCKIPSD-207ENST00000453349 GPR32O75388 356 aa16.22■□□□□ 0.19
NCKIPSD-207ENST00000453349 FGBP02675 491 aa16.22■□□□□ 0.19
NCKIPSD-207ENST00000453349 CMA1P23946 247 aa16.22■□□□□ 0.19
NCKIPSD-207ENST00000453349 STAT6P42226 847 aa16.22■□□□□ 0.19
NCKIPSD-207ENST00000453349 DRP2Q13474 957 aa16.22■□□□□ 0.19
NCKIPSD-207ENST00000453349 MCM6Q14566 821 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms