RNA–Protein interactions for RNA: ENST00000453187.1

LINC01287-202, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 3

Gene LINC01287, Length 430 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-202ENST00000453187 RDM1Q8NG50 284 aa11.96□□□□□ -0.49
LINC01287-202ENST00000453187 TOP1MTQ969P6 601 aa11.96□□□□□ -0.49
LINC01287-202ENST00000453187 NAP1L4Q99733 375 aaKnown RBP11.96□□□□□ -0.49
LINC01287-202ENST00000453187 KCNMB3Q9NPA1 279 aa11.96□□□□□ -0.49
LINC01287-202ENST00000453187 SH2B1Q9NRF2 756 aaPredicted RBP11.96□□□□□ -0.49
LINC01287-202ENST00000453187 PADI3Q9ULW8 664 aa11.96□□□□□ -0.49
LINC01287-202ENST00000453187 NOC2LQ9Y3T9 749 aaKnown RBP11.96□□□□□ -0.49
LINC01287-202ENST00000453187 PRRC2BQ5JSZ5 2229 aaKnown RBP11.95□□□□□ -0.5
LINC01287-202ENST00000453187 TRANK1O15050 2925 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 KDM3AQ9Y4C1 1321 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 DENND3A2RUS2 1198 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 ST18O60284 1047 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 TMOD1P28289 359 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 CTNNB1P35222 781 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 HTRA4P83105 476 aaPredicted RBP11.95□□□□□ -0.5
LINC01287-202ENST00000453187 PPP2R5CQ13362 524 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 DRP2Q13474 957 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 RABEP1Q15276 862 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 SAFBQ15424 915 aaKnown RBP eCLIP11.95□□□□□ -0.52e-6■■□□□ 12.8
LINC01287-202ENST00000453187 PPP4R3AQ6IN85 833 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 FAM228AQ86W67 206 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 NME8Q8N427 588 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 NLRP7Q8WX94 980 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 HAS1Q92839 578 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 ZSCAN31Q96LW9 406 aaPredicted RBP11.95□□□□□ -0.5
LINC01287-202ENST00000453187 FAM20AQ96MK3 541 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 LXNQ9BS40 222 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 ERVK-5Q9HDB9 667 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 NRBP2Q9NSY0 501 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 MTCH2Q9Y6C9 303 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 PLXNA4Q9HCM2 1894 aa11.95□□□□□ -0.5
LINC01287-202ENST00000453187 DDX11L8A8MPP1 907 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 MAGEB2O15479 319 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 MGEA5O60502 916 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 CD2BP2O95400 341 aaKnown RBP11.94□□□□□ -0.5
LINC01287-202ENST00000453187 BAG4O95429 457 aaKnown RBP11.94□□□□□ -0.5
LINC01287-202ENST00000453187 FGFR4P22455 802 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 MCM7P33993 719 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 GATMP50440 423 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 NLRP11P59045 1033 aaKnown RBP11.94□□□□□ -0.5
LINC01287-202ENST00000453187 ERVK-21P61565 698 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 PSMC5P62195 406 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 HMGN5P82970 282 aaKnown RBP11.94□□□□□ -0.5
LINC01287-202ENST00000453187 CTTNQ14247 550 aaKnown RBP11.94□□□□□ -0.5
LINC01287-202ENST00000453187 XKR3Q5GH77 459 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 B3GNT9Q6UX72 402 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 SP7Q8TDD2 431 aaPredicted RBP11.94□□□□□ -0.5
LINC01287-202ENST00000453187 DYDC2Q96IM9 177 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 FTHL17Q9BXU8 183 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 TMX1Q9H3N1 280 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 WRAP73Q9P2S5 460 aaPredicted RBP11.94□□□□□ -0.5
LINC01287-202ENST00000453187 THEGQ9P2T0 379 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 LRFN2Q9ULH4 789 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 ST3GAL5Q9UNP4 418 aa11.94□□□□□ -0.5
LINC01287-202ENST00000453187 POTEMA6NI47 508 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 ENPP3O14638 875 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 TBX3O15119 743 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 LPXNO60711 386 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 GPR32O75388 356 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 TXKP42681 527 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 QARSP47897 775 aaKnown RBP11.93□□□□□ -0.5
LINC01287-202ENST00000453187 GPC3P51654 580 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 CRYBB1P53674 252 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-202ENST00000453187 NPEPPSP55786 919 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 BTG3Q14201 252 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-202ENST00000453187 EPC2Q52LR7 807 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 NPAS4Q8IUM7 802 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 SLFN12Q8IYM2 578 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 FIBCD1Q8N539 461 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 LINC01465Q8N7H1 131 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 NLRP4Q96MN2 994 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 CCDC43Q96MW1 224 aaKnown RBP11.93□□□□□ -0.5
LINC01287-202ENST00000453187 ADAM2Q99965 735 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 LLPHQ9BRT6 129 aaKnown RBP11.93□□□□□ -0.5
LINC01287-202ENST00000453187 TSPYL2Q9H2G4 693 aaPredicted RBP11.93□□□□□ -0.5
LINC01287-202ENST00000453187 RGL1Q9NZL6 768 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 VCANP13611 3396 aa11.93□□□□□ -0.5
LINC01287-202ENST00000453187 DLL1O00548 723 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 GPR182O15218 404 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 CSDE1O75534 798 aaKnown RBP11.92□□□□□ -0.5
LINC01287-202ENST00000453187 STBD1O95210 358 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 P4HBP07237 508 aaKnown RBP11.92□□□□□ -0.5
LINC01287-202ENST00000453187 POLGP54098 1239 aaPredicted RBP11.92□□□□□ -0.5
LINC01287-202ENST00000453187 SPIRE1Q08AE8 756 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 NBR1Q14596 966 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 TARBP2Q15633 366 aaKnown RBP11.92□□□□□ -0.5
LINC01287-202ENST00000453187 ANO5Q75V66 913 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 RTN4RL1Q86UN2 441 aaPredicted RBP11.92□□□□□ -0.5
LINC01287-202ENST00000453187 RHPN2Q8IUC4 686 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 TMEM192Q8IY95 271 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 CEP170P1Q96L14 293 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 TMEM60Q9H2L4 133 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 TTC12Q9H892 705 aaPredicted RBP11.92□□□□□ -0.5
LINC01287-202ENST00000453187 RC3H2Q9HBD1 1191 aaKnown RBP11.92□□□□□ -0.5
LINC01287-202ENST00000453187 CYP26B1Q9NR63 512 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 MRPL42Q9Y6G3 142 aaKnown RBP11.92□□□□□ -0.5
LINC01287-202ENST00000453187 SQORQ9Y6N5 450 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 XIRP2A4UGR9 3374 aa11.92□□□□□ -0.5
LINC01287-202ENST00000453187 TCF20Q9UGU0 1960 aaKnown RBP11.92□□□□□ -0.5
LINC01287-202ENST00000453187 DKC1O60832 514 aaKnown RBP eCLIP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms