RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 CEP131Q9UPN4 1083 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 GINS2Q9Y248 185 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 NOC2LQ9Y3T9 749 aaKnown RBP12.36□□□□□ -0.43
USP1-204ENST00000452143 PCDHB7Q9Y5E2 793 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 PCDHB12Q9Y5F1 795 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 MAFBQ9Y5Q3 323 aaPredicted RBP12.36□□□□□ -0.43
USP1-204ENST00000452143 TECTAO75443 2155 aa12.36□□□□□ -0.43
USP1-204ENST00000452143 ZDBF2Q9HCK1 2354 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 C9IYK1 514 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 MGEA5O60502 916 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 CDC45O75419 566 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 C22orf31O95567 290 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 GNA11P29992 359 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 CRYBB1P53674 252 aaPredicted RBP12.35□□□□□ -0.43
USP1-204ENST00000452143 FGD1P98174 961 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 JAKMIP3Q5VZ66 844 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 SWSAP1Q6NVH7 229 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 CENPQQ7L2Z9 268 aaPredicted RBP12.35□□□□□ -0.43
USP1-204ENST00000452143 ADGRD2Q7Z7M1 963 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 CKAP2LQ8IYA6 745 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 ZNF710Q8N1W2 664 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 MS4A3Q96HJ5 214 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 FAM167AQ96KS9 214 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 CDCA3Q99618 268 aaPredicted RBP12.35□□□□□ -0.43
USP1-204ENST00000452143 ADAM2Q99965 735 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 ELAC1Q9H777 363 aaKnown RBP12.35□□□□□ -0.43
USP1-204ENST00000452143 C6orf50Q9HD87 102 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 TLR9Q9NR96 1032 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 TMEM161AQ9NX61 479 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 ST3GAL5Q9UNP4 418 aa12.35□□□□□ -0.43
USP1-204ENST00000452143 MAGEB2O15479 319 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 GLP2RO95838 553 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 PSAPP07602 524 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 ATP4AP20648 1035 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 CIITAP33076 1130 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 ADD1P35611 737 aaKnown RBP12.34□□□□□ -0.43
USP1-204ENST00000452143 NRIP1P48552 1158 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 GATMP50440 423 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 KIZQ2M2Z5 673 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 PDE12Q6L8Q7 609 aaKnown RBP12.34□□□□□ -0.43
USP1-204ENST00000452143 FBXL16Q8N461 479 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 CCDC148Q8NFR7 591 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 BICD2Q8TD16 824 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 OSMRQ99650 979 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 CLEC1BQ9P126 229 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 MUTYHQ9UIF7 546 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 NAP1L2Q9ULW6 460 aaPredicted RBP12.34□□□□□ -0.43
USP1-204ENST00000452143 PCDHA10Q9Y5I2 948 aa12.34□□□□□ -0.43
USP1-204ENST00000452143 TBKBP1A7MCY6 615 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 WDR64B1ANS9 1081 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 HOXA2O43364 376 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 GPR32O75388 356 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 FGF18O76093 207 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 SRGAP2BP0DMP2 458 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 LAG3P18627 525 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 SPOUT1Q5T280 376 aaKnown RBP12.33□□□□□ -0.44
USP1-204ENST00000452143 FAM228AQ86W67 206 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 RNF135Q8IUD6 432 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 METTL13Q8N6R0 699 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 MFSD14AQ96MC6 490 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 MAP7D2Q96T17 732 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 RNF26Q9BY78 433 aaPredicted RBP12.33□□□□□ -0.44
USP1-204ENST00000452143 CDHR5Q9HBB8 845 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 ATP6V0A4Q9HBG4 840 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 SCUBE2Q9NQ36 999 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 BARX2Q9UMQ3 279 aaPredicted RBP12.33□□□□□ -0.44
USP1-204ENST00000452143 LZTS1Q9Y250 596 aa12.33□□□□□ -0.44
USP1-204ENST00000452143 LOC730098B7Z3J9 87 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 PRPF3O43395 683 aaKnown RBP12.32□□□□□ -0.44
USP1-204ENST00000452143 VTNP04004 478 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 ATF7P17544 494 aaPredicted RBP12.32□□□□□ -0.44
USP1-204ENST00000452143 TMOD1P28289 359 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 PPM1AP35813 382 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 FAM189BP81408 668 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 APOBRQ0VD83 1088 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 DSC3Q14574 896 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 CBX2Q14781 532 aaPredicted RBP12.32□□□□□ -0.44
USP1-204ENST00000452143 PKN1Q16512 942 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 DUSP6Q16828 381 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 PRR16Q569H4 304 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 FAM102BQ5T8I3 360 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 LCE2DQ5TA82 110 aaPredicted RBP12.32□□□□□ -0.44
USP1-204ENST00000452143 HFE2Q6ZVN8 426 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 RBM23Q86U06 439 aaKnown RBP12.32□□□□□ -0.44
USP1-204ENST00000452143 THNSL1Q8IYQ7 743 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 LRRC43Q8N309 656 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 LINC01465Q8N7H1 131 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 COLGALT1Q8NBJ5 622 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 EDAQ92838 391 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 KCNB2Q92953 911 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 BRF1Q92994 677 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 LENG9Q96B70 501 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 AGXT2Q9BYV1 514 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 TMEM117Q9H0C3 514 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 TLE6Q9H808 572 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 GABBR1Q9UBS5 961 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 USP15Q9Y4E8 981 aaPredicted RBP12.32□□□□□ -0.44
USP1-204ENST00000452143 SAMM50Q9Y512 469 aa12.32□□□□□ -0.44
USP1-204ENST00000452143 FSCN2O14926 492 aa12.31□□□□□ -0.44
USP1-204ENST00000452143 OATP04181 439 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms