RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 CIAPIN1Q6FI81 312 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 PARVGQ9HBI0 331 aa13.22□□□□□ -0.29
COL27A1-202ENST00000451716 ZMYM2Q9UBW7 1377 aa13.21□□□□□ -0.29
COL27A1-202ENST00000451716 UCHL3P15374 230 aa13.21□□□□□ -0.29
COL27A1-202ENST00000451716 USP14P54578 494 aa13.21□□□□□ -0.29
COL27A1-202ENST00000451716 MUM1L1Q5H9M0 696 aa13.21□□□□□ -0.29
COL27A1-202ENST00000451716 DPY19L2P1Q6NXN4 242 aa13.21□□□□□ -0.29
COL27A1-202ENST00000451716 SAMD7Q7Z3H4 446 aa13.21□□□□□ -0.29
COL27A1-202ENST00000451716 CREG2Q8IUH2 290 aa13.21□□□□□ -0.29
COL27A1-202ENST00000451716 GSPT2Q8IYD1 628 aaKnown RBP13.21□□□□□ -0.29
COL27A1-202ENST00000451716 KCNH7Q9NS40 1196 aa13.21□□□□□ -0.29
COL27A1-202ENST00000451716 L1RE1Q9UN81 338 aa13.21□□□□□ -0.29
COL27A1-202ENST00000451716 STK24Q9Y6E0 443 aa13.21□□□□□ -0.29
COL27A1-202ENST00000451716 TMEM150BA6NC51 233 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 H0YHG0 523 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 H3BQF6 201 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 ATP8B1O43520 1251 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 ICAM1P05362 532 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 KLRC1P26715 233 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 CYP2J2P51589 502 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 SARNPP82979 210 aaKnown RBP13.21□□□□□ -0.3
COL27A1-202ENST00000451716 ASIC2Q16515 512 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 MAP9Q49MG5 647 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 TBC1D10BQ4KMP7 808 aaPredicted RBP13.21□□□□□ -0.3
COL27A1-202ENST00000451716 ODR4Q5SWX8 454 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 MTMR14Q8NCE2 650 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 SLC35C1Q96A29 364 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 ZBED3Q96IU2 234 aaPredicted RBP13.21□□□□□ -0.3
COL27A1-202ENST00000451716 SPAG5Q96R06 1193 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 MXRA8Q9BRK3 442 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 TEKT3Q9BXF9 490 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 PDE11AQ9HCR9 933 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 OLFML3Q9NRN5 406 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 BCS1LQ9Y276 419 aa13.21□□□□□ -0.3
COL27A1-202ENST00000451716 MAP2K7O14733 419 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 ERLIN1O75477 346 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 EPB41P11171 864 aaKnown RBP13.2□□□□□ -0.3
COL27A1-202ENST00000451716 MAP2K2P36507 400 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 PTK2Q05397 1052 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 BMT2Q1RMZ1 405 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 KLHDC7AQ5VTJ3 777 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 PRAMEF18Q5VWM3 479 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 FAM178BQ8IXR5 827 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 RDH13Q8NBN7 331 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 RBM46Q8TBY0 533 aaKnown RBP13.2□□□□□ -0.3
COL27A1-202ENST00000451716 HNRNPLLQ8WVV9 542 aaKnown RBP13.2□□□□□ -0.3
COL27A1-202ENST00000451716 CLEC4DQ8WXI8 215 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 JDP2Q8WYK2 163 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 ALS2CR12Q96Q35 445 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 NACC1Q96RE7 527 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 FIZ1Q96SL8 496 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 OSBPL9Q96SU4 736 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 EHMT1Q9H9B1 1298 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 PIM2Q9P1W9 311 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 SAMM50Q9Y512 469 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 N4BP1O75113 896 aaKnown RBP13.2□□□□□ -0.3
COL27A1-202ENST00000451716 FLOT1O75955 427 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 FTCDO95954 541 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 EIF2AK2P19525 551 aaKnown RBP13.2□□□□□ -0.3
COL27A1-202ENST00000451716 RPL13P26373 211 aaKnown RBP13.2□□□□□ -0.3
COL27A1-202ENST00000451716 PTPROQ16827 1216 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 KIAA0753Q2KHM9 967 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 TTC31Q49AM3 519 aaPredicted RBP13.2□□□□□ -0.3
COL27A1-202ENST00000451716 SYN2Q92777 582 aaPredicted RBP13.2□□□□□ -0.3
COL27A1-202ENST00000451716 TEPSINQ96N21 525 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 UBXN6Q9BZV1 441 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 NUCKS1Q9H1E3 243 aaKnown RBP13.2□□□□□ -0.3
COL27A1-202ENST00000451716 GCNT4Q9P109 453 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 PACSIN2Q9UNF0 486 aaPredicted RBP13.2□□□□□ -0.3
COL27A1-202ENST00000451716 RPS6KL1Q9Y6S9 549 aa13.2□□□□□ -0.3
COL27A1-202ENST00000451716 PJA2O43164 708 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 GAP43P17677 238 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 CKAP4Q07065 602 aaKnown RBP13.19□□□□□ -0.3
COL27A1-202ENST00000451716 EPHA7Q15375 998 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 SLC18A3Q16572 532 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 ZNF720Q7Z2F6 126 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 ZNF571Q7Z3V5 609 aaPredicted RBP13.19□□□□□ -0.3
COL27A1-202ENST00000451716 IRF2BP2Q7Z5L9 587 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 PRPF38AQ8NAV1 312 aaKnown RBP13.19□□□□□ -0.3
COL27A1-202ENST00000451716 HDAC7Q8WUI4 952 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 MS4A14Q96JA4 679 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 NOX5Q96PH1 765 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 TLR10Q9BXR5 811 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 AIPL1Q9NZN9 384 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 ARHGEF35A5YM69 484 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 TISP43B9A030 160 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 RBAK-RBAKDNI3L0D1 243 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 PLA2G6O60733 806 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 HIP1RO75146 1068 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 PALMO75781 387 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 HSD17B4P51659 736 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 ITGB3BPQ13352 177 aaPredicted RBP13.19□□□□□ -0.3
COL27A1-202ENST00000451716 SF3B2Q13435 895 aaKnown RBP13.19□□□□□ -0.3
COL27A1-202ENST00000451716 MTMR2Q13614 643 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 C11orf91Q3C1V1 193 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 HDXQ7Z353 690 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 FAM186BQ8IYM0 893 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 WNK4Q96J92 1243 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 TAOK3Q9H2K8 898 aa13.19□□□□□ -0.3
COL27A1-202ENST00000451716 GOLPH3Q9H4A6 298 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms